RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 CBX6O95503 412 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 POLBP06746 335 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 ARFIP2P53365 341 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 UNC5AQ6ZN44 842 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 SLC26A11Q86WA9 606 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 IFNLR1Q8IU57 520 aaPredicted RBP16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 SPNS2Q8IVW8 549 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 LINC01465Q8N7H1 131 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 SGSM3Q96HU1 749 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 SRPK1Q96SB4 655 aaKnown RBP16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 TMEM30AQ9NV96 361 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 GMIPQ9P107 970 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 DDHD2O94830 711 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 CYBAP13498 195 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 MX2P20592 715 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 OR1D2P34982 312 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 ARHGAP36Q6ZRI8 547 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 SERINC5Q86VE9 423 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 NAT8LQ8N9F0 302 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 TMEM174Q8WUU8 243 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 CYP2S1Q96SQ9 504 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 CHRAC1Q9NRG0 131 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 PLK2Q9NYY3 685 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 ZFP69BQ9UJL9 534 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 A0A0A0MRY4 1105 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 A0A0U1RQF3 1178 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 ATXN3P54252 364 aaPredicted RBP16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 USP10Q14694 798 aaKnown RBP16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 MTFR1Q15390 333 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 NCBP2-AS2Q69YL0 99 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 SLC24A5Q71RS6 500 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 ECHDC2Q86YB7 292 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 ZNF567Q8N184 647 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 SPATA13Q96N96 652 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 SRRDQ9UH36 339 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 RABGEF1Q9UJ41 708 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 ARL2BPQ9Y2Y0 163 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 ZNFX1Q9P2E3 1918 aaKnown RBP16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 FOXN2P32314 431 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 WDR4P57081 412 aaKnown RBP16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 TAF10Q12962 218 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 FASTKD1Q53R41 847 aaKnown RBP16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 ARHGAP17Q68EM7 881 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 RHBDF2Q6PJF5 856 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 MTDHQ86UE4 582 aaKnown RBP16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 KCNE1P15382 129 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 CHRNA4P43681 627 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 ENPEPQ07075 957 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 ZNF235Q14590 738 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 INTS6LQ5JSJ4 861 aaKnown RBP16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 PTAR1Q7Z6K3 402 aaPredicted RBP16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 TMEM86AQ8N2M4 240 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 MOCOSQ96EN8 888 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 CHST12Q9NRB3 414 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 TBC1D13Q9NVG8 400 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 SHOX2O60902 331 aaPredicted RBP16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 VAV1P15498 845 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 IL4RP24394 825 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 GARSP41250 739 aaKnown RBP16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 TBX4P57082 545 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 PRAMEP78395 509 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 NR1H3Q13133 447 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 CTBP1Q13363 440 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 LDB1Q86U70 411 aaPredicted RBP16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 SERAC1Q96JX3 654 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 CNGB3Q9NQW8 809 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 ZNF358Q9NW07 568 aa16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 SMG5Q9UPR3 1016 aaKnown RBP16.3■□□□□ 0.2
SMARCD1-202ENST00000394963 SCTRP47872 440 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 ZBTB6Q15916 424 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 TTC39BQ5VTQ0 682 aaPredicted RBP16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 PTPRN2Q92932 1015 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 PPP1R10Q96QC0 940 aaKnown RBP16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 CYP4F12Q9HCS2 524 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 PTCH2Q9Y6C5 1203 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 FBXO21O94952 628 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 PMLP29590 882 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 OR1E1P30953 314 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 PLK1P53350 603 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 EPHB1P54762 984 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 GRIK3Q13003 919 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 TCEAL1Q15170 157 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 DLG2Q15700 870 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 VARS2Q5ST30 1063 aaKnown RBP16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 ZNF75CPQ92670 426 aaPredicted RBP16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 CASP10Q92851 521 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 IFT43Q96FT9 208 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 FOXP3Q9BZS1 431 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 TASP1Q9H6P5 420 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 HEY2Q9UBP5 337 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 PCDHB5Q9Y5E4 795 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 TCRBV5S1A1TA0A578 114 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 ARHGEF37A1IGU5 675 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 CBX4O00257 560 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 F9P00740 461 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 ENO1P06733 434 aaKnown RBP16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 CSH1P0DML2 217 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 CSH2P0DML3 217 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 YWHAQP27348 245 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 WEE1P30291 646 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms