RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 RNF139Q8WU17 664 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 TATDN2Q93075 761 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 TMA16Q96EY4 203 aaKnown RBP6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 C1orf74Q96LT6 269 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 PRORYQ9H606 182 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 ANKRD6Q9Y2G4 727 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 TBC1D30Q9Y2I9 924 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 MYO18AQ92614 2054 aaKnown RBP6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 IGLV3-10A0A075B6K4 115 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 YJEFN3A6XGL0 299 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 E7ENQ6 273 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 AP1G1O43747 822 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 ABL1P00519 1130 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 CFIP05156 583 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 POLR2EP19388 210 aaKnown RBP6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 SLC6A4P31645 630 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 TBX4P57082 545 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 SNX16P57768 344 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 FAM193AP78312 1265 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 ADIGQ0VDE8 80 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 ANKRD40Q6AI12 368 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 PGBD3Q8N328 593 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 LENG8Q96PV6 779 aaPredicted RBP6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 MED15Q96RN5 788 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 FAM129BQ96TA1 746 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 ZSWIM1Q9BR11 485 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 CEP44Q9C0F1 390 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 CCDC86Q9H6F5 360 aaKnown RBP6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 ARHGEF38Q9NXL2 777 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 INVSQ9Y283 1065 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 PCDHB9Q9Y5E1 797 aa6.46□□□□□ -1.38
SMARCAD1-203ENST00000394961 LRRC72A6NJI9 287 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 TRIM24O15164 1050 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 SH3BP5O60239 455 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 FGFR1OPO95684 399 aaKnown RBP6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 DNTTP04053 509 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 ACADVLP49748 655 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 GALCP54803 685 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 CETN1Q12798 172 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 STIM1Q13586 685 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 PROX2Q3B8N5 592 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 PITRM1Q5JRX3 1037 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 BRMS1LQ5PSV4 323 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 TPGS1Q6ZTW0 290 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 SIX6OS1Q8N1H7 587 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 C1orf131Q8NDD1 294 aaKnown RBP6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 HCAR2Q8TDS4 363 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 NXPE2Q96DL1 559 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 GPR174Q9BXC1 333 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 GAREM1Q9H706 876 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 NCKIPSDQ9NZQ3 722 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 CLEC4EQ9ULY5 219 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 HS3ST2Q9Y278 367 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 FNDC3AQ9Y2H6 1198 aaKnown RBP6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 CSNK1G3Q9Y6M4 447 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 ATXN2Q99700 1313 aaKnown RBP6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 SPAARA0A1B0GVQ0 90 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 TYW5A2RUC4 315 aaKnown RBP6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 DRGXA6NNA5 263 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 RNASEH1O60930 286 aaKnown RBP6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 DAB1O75553 588 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 MOCS3O95396 460 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 EPHA8P29322 1005 aaPredicted RBP6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 SKOR1P84550 965 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 E2F1Q01094 437 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 SCAPQ12770 1279 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 ELAVL3Q14576 367 aaKnown RBP6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 KIAA1324Q6UXG2 1013 aaKnown RBP6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 ATP6V0D2Q8N8Y2 350 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 DQX1Q8TE96 717 aaKnown RBP6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 NOC3LQ8WTT2 800 aaKnown RBP6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 SPAG5Q96R06 1193 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 HDAC8Q9BY41 377 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 CYTH4Q9UIA0 394 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 INTS6Q9UL03 887 aaKnown RBP6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 PLA2G4CQ9UP65 541 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 LHX6Q9UPM6 363 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 RAD54BQ9Y620 910 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 PPP1R3GB7ZBB8 358 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 PSMA7O14818 248 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 MDM4O15151 490 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 ENDOD1O94919 500 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 CST6Q15828 149 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 SERPINA13PQ6UXR4 307 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 DCBLD1Q8N8Z6 715 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 DDI1Q8WTU0 396 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 TFAP2BQ92481 460 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 BIRC7Q96CA5 298 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 THAP9Q9H5L6 903 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 POPDC2Q9HBU9 364 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 LRRK1Q38SD2 2015 aa6.45□□□□□ -1.38
SMARCAD1-203ENST00000394961 A0A1B0GVM2 712 aa6.44□□□□□ -1.38
SMARCAD1-203ENST00000394961 TCAF2A6NFQ2 919 aa6.44□□□□□ -1.38
SMARCAD1-203ENST00000394961 ATXN7O15265 892 aaPredicted RBP6.44□□□□□ -1.38
SMARCAD1-203ENST00000394961 EPHX1P07099 455 aa6.44□□□□□ -1.38
SMARCAD1-203ENST00000394961 MAPK8P45983 427 aa6.44□□□□□ -1.38
SMARCAD1-203ENST00000394961 SUOXP51687 545 aa6.44□□□□□ -1.38
SMARCAD1-203ENST00000394961 NUCB2P80303 420 aa6.44□□□□□ -1.38
SMARCAD1-203ENST00000394961 CCDC15Q0P6D6 951 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms