RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 CD6P30203 668 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 CDH5P33151 784 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-205ENST00000394892 CSKP41240 450 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 MAPK8P45983 427 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 SLC11A2P49281 568 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 RPS14P62263 151 aaKnown RBP9.17□□□□□ -0.94
ATG4A-205ENST00000394892 FAM193AP78312 1265 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 KRT31Q15323 416 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 RAB6CQ53S08 254 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 CXorf57Q6NSI4 855 aaKnown RBP9.17□□□□□ -0.94
ATG4A-205ENST00000394892 FBXL22Q6P050 247 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 SERPINA13PQ6UXR4 307 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 SLC36A4Q6YBV0 504 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 PIP4P1Q86T03 277 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 NOP9Q86U38 636 aaKnown RBP9.17□□□□□ -0.94
ATG4A-205ENST00000394892 MFN1Q8IWA4 741 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 ZNF683Q8IZ20 524 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 LGI2Q8N0V4 545 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 HJURPQ8NCD3 748 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-205ENST00000394892 DEFB124Q8NES8 71 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 OR2T3Q8NH03 318 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 ENOX1Q8TC92 643 aaKnown RBP9.17□□□□□ -0.94
ATG4A-205ENST00000394892 WFIKKN2Q8TEU8 576 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 SLC20A1Q8WUM9 679 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 DNASE2BQ8WZ79 361 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 IGSF8Q969P0 613 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 SIPA1Q96FS4 1042 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 FAM129BQ96TA1 746 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 GPR174Q9BXC1 333 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 RAB6CQ9H0N0 254 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 C6orf106Q9H6K1 298 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-205ENST00000394892 ASNSD1Q9NWL6 643 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 SERGEFQ9UGK8 458 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 SLCO3A1Q9UIG8 710 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 NFE2L3Q9Y4A8 694 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 NEUROG3Q9Y4Z2 214 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 SNX10Q9Y5X0 201 aa9.17□□□□□ -0.94
ATG4A-205ENST00000394892 MUC22E2RYF6 1773 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-205ENST00000394892 SPAG17Q6Q759 2223 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 CHD6Q8TD26 2715 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 SRRM3A6NNA2 597 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-205ENST00000394892 TTC34A8MYJ7 566 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 SART1O43290 800 aaKnown RBP9.16□□□□□ -0.94
ATG4A-205ENST00000394892 SIN3BO75182 1162 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 LUC7L3O95232 432 aaKnown RBP9.16□□□□□ -0.94
ATG4A-205ENST00000394892 ADCY5O95622 1261 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 CFIP05156 583 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 GLI1P08151 1106 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 SERPINF2P08697 491 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 CD59P13987 128 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 VAV1P15498 845 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 CYP11B1P15538 503 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 ACSL1P33121 698 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 HOXD12P35452 270 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 GABRB2P47870 512 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 STK19P49842 368 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-205ENST00000394892 METAP1P53582 386 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 ZNF445P59923 1031 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 SIM1P81133 766 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-205ENST00000394892 SLC6A3Q01959 620 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 CENPCQ03188 943 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 PTK2Q05397 1052 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 GFPT1Q06210 699 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-205ENST00000394892 SEMA3BQ13214 749 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 HNRNPDQ14103 355 aaKnown RBP9.16□□□□□ -0.94
ATG4A-205ENST00000394892 STARD3Q14849 445 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 NCAPHQ15003 741 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 FNDC3BQ53EP0 1204 aaKnown RBP9.16□□□□□ -0.94
ATG4A-205ENST00000394892 PITRM1Q5JRX3 1037 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 C9orf64Q5T6V5 341 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 TAF3Q5VWG9 929 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 OR6B2Q6IFH4 312 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 LRSAM1Q6UWE0 723 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 SLC26A9Q7LBE3 791 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 BNIPLQ7Z465 357 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 RABEPKQ7Z6M1 372 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 FAM124AQ86V42 546 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 XYLT1Q86Y38 959 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 AHI1Q8N157 1196 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 CARNMT1Q8N4J0 409 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 ZNF397Q8NF99 534 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-205ENST00000394892 CEP76Q8TAP6 659 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 UCMAQ8WVF2 138 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 NT5C3BQ969T7 300 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 PCDHB18PQ96TA0 734 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 NPY6RQ99463 290 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 IRX2Q9BZI1 471 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-205ENST00000394892 VPS16Q9H269 839 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 EBF2Q9HAK2 575 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 PIGVQ9NUD9 493 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 FANCLQ9NW38 375 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 DDIT4Q9NX09 232 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 NOCTQ9UK39 431 aaKnown RBP9.16□□□□□ -0.94
ATG4A-205ENST00000394892 SLC6A14Q9UN76 642 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 LHX6Q9UPM6 363 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 SIK3Q9Y2K2 1263 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 OR51B4Q9Y5P0 310 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 CEP295Q9C0D2 2601 aa9.16□□□□□ -0.94
ATG4A-205ENST00000394892 ASPMQ8IZT6 3477 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 SPEGQ15772 3267 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms