RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 CHADO15335 359 aa20.22■□□□□ 0.83
RAB5C-202ENST00000393860 AVILO75366 819 aa20.22■□□□□ 0.83
RAB5C-202ENST00000393860 CNPP09543 421 aaKnown RBP20.22■□□□□ 0.83
RAB5C-202ENST00000393860 CSH1P0DML2 217 aa20.22■□□□□ 0.83
RAB5C-202ENST00000393860 CSH2P0DML3 217 aa20.22■□□□□ 0.83
RAB5C-202ENST00000393860 SLC2A3P11169 496 aa20.22■□□□□ 0.83
RAB5C-202ENST00000393860 SERPINB6P35237 376 aa20.22■□□□□ 0.83
RAB5C-202ENST00000393860 KCNQ1P51787 676 aa20.22■□□□□ 0.83
RAB5C-202ENST00000393860 PPARDQ03181 441 aa20.22■□□□□ 0.83
RAB5C-202ENST00000393860 LONRF1Q17RB8 773 aa20.22■□□□□ 0.83
RAB5C-202ENST00000393860 PSRC1Q6PGN9 363 aaPredicted RBP20.22■□□□□ 0.83
RAB5C-202ENST00000393860 ARHGAP36Q6ZRI8 547 aa20.22■□□□□ 0.83
RAB5C-202ENST00000393860 WDR83Q9BRX9 315 aaKnown RBP20.22■□□□□ 0.83
RAB5C-202ENST00000393860 NACA2Q9H009 215 aa20.22■□□□□ 0.83
RAB5C-202ENST00000393860 SLC4A7Q9Y6M7 1214 aa20.22■□□□□ 0.83
RAB5C-202ENST00000393860 ZNF840PA6NDX5 716 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 TLL1O43897 1013 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 LILRB3O75022 631 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 HOXC13P31276 330 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 MLLT6P55198 1093 aaPredicted RBP20.21■□□□□ 0.83
RAB5C-202ENST00000393860 GALNT2Q10471 571 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 RELL1Q8IUW5 271 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 ZNF567Q8N184 647 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 ATP6V0D2Q8N8Y2 350 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 ALG13Q9NP73 1137 aaKnown RBP20.21■□□□□ 0.83
RAB5C-202ENST00000393860 INSL5Q9Y5Q6 135 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.21■□□□□ 0.83
RAB5C-202ENST00000393860 GOLGA6L7A0A1B0GV03 622 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 STK10O94804 968 aaKnown RBP20.21■□□□□ 0.83
RAB5C-202ENST00000393860 CTSAP10619 480 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 GARSP41250 739 aaKnown RBP20.21■□□□□ 0.83
RAB5C-202ENST00000393860 PPIDQ08752 370 aaKnown RBP20.21■□□□□ 0.83
RAB5C-202ENST00000393860 AUHQ13825 339 aaKnown RBP20.21■□□□□ 0.83
RAB5C-202ENST00000393860 VEPH1Q14D04 833 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 CEP128Q6ZU80 1094 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 SPRED2Q7Z698 418 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 TFAP2DQ7Z6R9 452 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 ARHGAP12Q8IWW6 846 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 CATSPERBQ9H7T0 1116 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 VPS37BQ9H9H4 285 aa20.21■□□□□ 0.83
RAB5C-202ENST00000393860 E7EVH7 732 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 ALOX15BO15296 676 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 FGF10O15520 208 aaPredicted RBP20.2■□□□□ 0.82
RAB5C-202ENST00000393860 COCHO43405 550 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 IGLV3-27P01718 113 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 ATP2A2P16615 1042 aaKnown RBP20.2■□□□□ 0.82
RAB5C-202ENST00000393860 PTPN3P26045 913 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 PSMB4P28070 264 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 CTNNB1P35222 781 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 TMC7Q7Z402 723 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 CIR1Q86X95 450 aaPredicted RBP20.2■□□□□ 0.82
RAB5C-202ENST00000393860 ZNF683Q8IZ20 524 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 FBXO36Q8NEA4 188 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 PDZD8Q8NEN9 1154 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 FAM76AQ8TAV0 307 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 CLP1Q92989 425 aaKnown RBP20.2■□□□□ 0.82
RAB5C-202ENST00000393860 HDAC11Q96DB2 347 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 BTN2A3PQ96KV6 586 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 SLC39A8Q9C0K1 460 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 TRPM5Q9NZQ8 1165 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 KLHL8Q9P2G9 620 aaPredicted RBP20.2■□□□□ 0.82
RAB5C-202ENST00000393860 HSFX1Q9UBD0 423 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 DNMT3LQ9UJW3 386 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 ADAM21Q9UKJ8 722 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 NOVA2Q9UNW9 492 aaKnown RBP20.2■□□□□ 0.82
RAB5C-202ENST00000393860 CHMP2BQ9UQN3 213 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 RAD54BQ9Y620 910 aa20.2■□□□□ 0.82
RAB5C-202ENST00000393860 C2orf78A6NCI8 922 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 TGM5O43548 720 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 CNTN5O94779 1100 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 CXCL14O95715 111 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 ATP5C1P36542 298 aaKnown RBP20.19■□□□□ 0.82
RAB5C-202ENST00000393860 ZBTB17Q13105 803 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 HECTD3Q5T447 861 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 DNAJB7Q7Z6W7 309 aaPredicted RBP20.19■□□□□ 0.82
RAB5C-202ENST00000393860 IGDCC3Q8IVU1 814 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 TCEAL8Q8IYN2 117 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 PDIK1LQ8N165 341 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 USP33Q8TEY7 942 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 IGSF8Q969P0 613 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 MYEOVQ96EZ4 313 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 C1orf74Q96LT6 269 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 CEP295NLQ96MC4 621 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 SERPINB12Q96P63 405 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 RAD9AQ99638 391 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 FERMT1Q9BQL6 677 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 ZNF334Q9HCZ1 680 aaPredicted RBP20.19■□□□□ 0.82
RAB5C-202ENST00000393860 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.19■□□□□ 0.82
RAB5C-202ENST00000393860 FNIP2Q9P278 1114 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 SLC12A6Q9UHW9 1150 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 NYNRINQ9P2P1 1898 aaKnown RBP20.19■□□□□ 0.82
RAB5C-202ENST00000393860 CARNS1A5YM72 827 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 MX2P20592 715 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 GRIA1P42261 906 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 LMAN1P49257 510 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 ALFQ53S48 1182 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 NADSYN1Q6IA69 706 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 PID1Q7Z2X4 250 aa20.19■□□□□ 0.82
RAB5C-202ENST00000393860 AGGF1Q8N302 714 aaeCLIP20.19■□□□□ 0.82
RAB5C-202ENST00000393860 PYROXD1Q8WU10 500 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms