RNA–Protein interactions for RNA: ENST00000393572.5

FAM3A-205, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-205ENST00000393572 RXFP3Q9NSD7 469 aa18.11■□□□□ 0.49
FAM3A-205ENST00000393572 SCML1Q9UN30 329 aa18.11■□□□□ 0.49
FAM3A-205ENST00000393572 CEP192Q8TEP8 1941 aa18.11■□□□□ 0.49
FAM3A-205ENST00000393572 SPTBN2O15020 2390 aa18.11■□□□□ 0.49
FAM3A-205ENST00000393572 C4orf47A7E2U8 309 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 F9P00740 461 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 SRPRAP08240 638 aaKnown RBP18.1■□□□□ 0.49
FAM3A-205ENST00000393572 SYPP08247 313 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 SERPINF2P08697 491 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 ITPKAP23677 461 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 CD70P32970 193 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 MATKP42679 507 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 GABRB2P47870 512 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 TPMTP51580 245 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 RPS24P62847 133 aaKnown RBP18.1■□□□□ 0.49
FAM3A-205ENST00000393572 IRX4P78413 519 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 GFPT1Q06210 699 aaPredicted RBP18.1■□□□□ 0.49
FAM3A-205ENST00000393572 SULT2A1Q06520 285 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 ARID5BQ14865 1188 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 KRT31Q15323 416 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 TTC31Q49AM3 519 aaPredicted RBP18.1■□□□□ 0.49
FAM3A-205ENST00000393572 PTPN20Q4JDL3 420 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 CCDC183Q5T5S1 534 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 SND1Q7KZF4 910 aaKnown RBP eCLIP18.1■□□□□ 0.49
FAM3A-205ENST00000393572 ERICH1Q86X53 443 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 RGL4Q8IZJ4 473 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 CYB5D2Q8WUJ1 264 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 C18orf8Q96DM3 657 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 TOE1Q96GM8 510 aaKnown RBP18.1■□□□□ 0.49
FAM3A-205ENST00000393572 TAB2Q9NYJ8 693 aa18.1■□□□□ 0.49
FAM3A-205ENST00000393572 AJAP1Q9UKB5 411 aaPredicted RBP18.1■□□□□ 0.49
FAM3A-205ENST00000393572 TNRC6BQ9UPQ9 1833 aaKnown RBP18.09■□□□□ 0.49
FAM3A-205ENST00000393572 A0A1B0GVM2 712 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 TCAF2A6NFQ2 919 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 F8VZ95 297 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 RNASEH1O60930 286 aaKnown RBP18.09■□□□□ 0.49
FAM3A-205ENST00000393572 ERBB2P04626 1255 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 ADRB1P08588 477 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 NNMTP40261 264 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 MYL5Q02045 173 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 TAF5Q15542 800 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 PTPRNQ16849 979 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 BRMS1LQ5PSV4 323 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 RNF219Q5W0B1 726 aaPredicted RBP18.09■□□□□ 0.49
FAM3A-205ENST00000393572 RAP1GAP2Q684P5 730 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 WFDC5Q8TCV5 224 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 LMLNQ96KR4 655 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 NAT10Q9H0A0 1025 aaKnown RBP18.09■□□□□ 0.49
FAM3A-205ENST00000393572 SLC6A17Q9H1V8 727 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 VPS16Q9H269 839 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 TMEM74BQ9NUR3 256 aa18.09■□□□□ 0.49
FAM3A-205ENST00000393572 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.09■□□□□ 0.49
FAM3A-205ENST00000393572 MEI4A8MW99 385 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 PATE3B3GLJ2 98 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 DNTTP04053 509 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 CFIP05156 583 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 HLA-EP13747 358 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 CSKP41240 450 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 PITRM1Q5JRX3 1037 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 ZNF776Q68DI1 518 aaPredicted RBP18.08■□□□□ 0.48
FAM3A-205ENST00000393572 ARCQ7LC44 396 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 SLC41A1Q8IVJ1 513 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 DNASE2BQ8WZ79 361 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 PGAP3Q96FM1 320 aaPredicted RBP18.08■□□□□ 0.48
FAM3A-205ENST00000393572 SPAG5Q96R06 1193 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 ZDHHC5Q9C0B5 715 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 NCOR2Q9Y618 2525 aa18.08■□□□□ 0.48
FAM3A-205ENST00000393572 SYNJ2BP-COX16A0A087WUM0 186 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 TARSL2A2RTX5 802 aaKnown RBP18.07■□□□□ 0.48
FAM3A-205ENST00000393572 M0QYT0 321 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 CDX4O14627 284 aaPredicted RBP18.07■□□□□ 0.48
FAM3A-205ENST00000393572 GRAP2O75791 330 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 PNMA6AP0CW24 399 aaPredicted RBP18.07■□□□□ 0.48
FAM3A-205ENST00000393572 ENGP17813 658 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 CDK11BP21127 795 aaKnown RBP18.07■□□□□ 0.48
FAM3A-205ENST00000393572 CSRP1P21291 193 aaKnown RBP18.07■□□□□ 0.48
FAM3A-205ENST00000393572 ECT2LQ008S8 904 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 NME3Q13232 169 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 HNRNPA1L2Q32P51 320 aaKnown RBP18.07■□□□□ 0.48
FAM3A-205ENST00000393572 PLEKHG6Q3KR16 790 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 LRSAM1Q6UWE0 723 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 TRIM72Q6ZMU5 477 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 CFAP52Q8N1V2 620 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 HDDC3Q8N4P3 179 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 EPS8L1Q8TE68 723 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 ERLEC1Q96DZ1 483 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 RPRD1AQ96P16 312 aaPredicted RBP18.07■□□□□ 0.48
FAM3A-205ENST00000393572 PRMT1Q99873 361 aaKnown RBP18.07■□□□□ 0.48
FAM3A-205ENST00000393572 GPR174Q9BXC1 333 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 WDCPQ9H6R7 721 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 CAPN10Q9HC96 672 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 PRSS16Q9NQE7 514 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 FANCLQ9NW38 375 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 COX16Q9P0S2 106 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 XPO7Q9UIA9 1087 aaKnown RBP18.07■□□□□ 0.48
FAM3A-205ENST00000393572 NCKAP1Q9Y2A7 1128 aa18.07■□□□□ 0.48
FAM3A-205ENST00000393572 ATXN2Q99700 1313 aaKnown RBP18.06■□□□□ 0.48
FAM3A-205ENST00000393572 A0A1B0GTW7 788 aa18.06■□□□□ 0.48
FAM3A-205ENST00000393572 LRRC10BA6NIK2 292 aa18.06■□□□□ 0.48
FAM3A-205ENST00000393572 METTL12A8MUP2 240 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms