RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 GGA2Q9UJY4 613 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 MMP17Q9ULZ9 603 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 MUC6Q6W4X9 2439 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 I6L893 689 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 LUC7L3O95232 432 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 PABPC1P11940 636 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 PSMA2P25787 234 aa19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 SCYL2Q6P3W7 929 aa19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 KIAA0907Q7Z7F0 614 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 TC2NQ8N9U0 490 aa19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 IGSF8Q969P0 613 aa19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 CIPCQ9C0C6 399 aa19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 THAP2Q9H0W7 228 aa19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 TMPRSS4Q9NRS4 437 aa19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 KIAA1522Q9P206 1035 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 SNX10Q9Y5X0 201 aa19.61■□□□□ 0.73
PDLIM7-204ENST00000393546 A0A1B0GVM2 712 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 TCAF2A6NFQ2 919 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 K7ESF4 209 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 NPC1O15118 1278 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 CHRM1P11229 460 aaPredicted RBP19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 HNRNPLP14866 589 aaKnown RBP eCLIP19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 NTSR1P30989 418 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 CD70P32970 193 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 GGCXP38435 758 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 GALCP54803 685 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 OXCT1P55809 520 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 OGDHQ02218 1023 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 C5orf22Q49AR2 442 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 EGFLAMQ63HQ2 1017 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 CHST9Q7L1S5 443 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 CHPFQ8IZ52 775 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 AHI1Q8N157 1196 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 CCAR2Q8N163 923 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 CAMKK1Q8N5S9 505 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 WFDC5Q8TCV5 224 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 FNIP1Q8TF40 1166 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 NTAN1Q96AB6 310 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 OSBPL2Q9H1P3 480 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 ZDHHC4Q9NPG8 344 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 POLR3BQ9NW08 1133 aaPredicted RBP19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 HCN2Q9UL51 889 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 NENFQ9UMX5 172 aa19.6■□□□□ 0.73
PDLIM7-204ENST00000393546 CACNA1HO95180 2353 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 DRGXA6NNA5 263 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 E9PAM4 449 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 SGK1O00141 431 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 SRGAP2O75044 1071 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 CLDN11O75508 207 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 RNF8O76064 485 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 MOCS3O95396 460 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 CYP1A2P05177 515 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 TDGF1P13385 188 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 POLR2EP19388 210 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 HOXA6P31267 233 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 CDH4P55283 916 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 LMAN2Q12907 356 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 ZNF177Q13360 481 aaPredicted RBP19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 SLC12A1Q13621 1099 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 TMEM215Q68D42 235 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 SLFN11Q7Z7L1 901 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 CIR1Q86X95 450 aaPredicted RBP19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 LMLNQ96KR4 655 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 PPP1R9BQ96SB3 815 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 NCAPGQ9BPX3 1015 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 ZSCAN32Q9NX65 697 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 OR12D3Q9UGF7 316 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 PLA2G4CQ9UP65 541 aa19.59■□□□□ 0.73
PDLIM7-204ENST00000393546 ATP5BP06576 529 aaKnown RBP19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 H2AFZP0C0S5 128 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 WASP42768 502 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 DGKEP52429 567 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 AIF1P55008 147 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 CRY1Q16526 586 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 FSCBQ5H9T9 825 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 MBLAC2Q68D91 279 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 ZC3H14Q6PJT7 736 aaKnown RBP19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 H2AFVQ71UI9 128 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 ADIPOR2Q86V24 386 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 ZNF683Q8IZ20 524 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 CCDC185Q8N715 623 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 ATRIPQ8WXE1 791 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 CTNNBL1Q8WYA6 563 aaPredicted RBP19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 NELL1Q92832 810 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 ACOX2Q99424 681 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 NUP85Q9BW27 656 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 TRIM7Q9C029 511 aa19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 POLMQ9NP87 494 aaPredicted RBP19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 THAP10Q9P2Z0 257 aaPredicted RBP19.58■□□□□ 0.72
PDLIM7-204ENST00000393546 WDFY4Q6ZS81 3184 aa19.57■□□□□ 0.72
PDLIM7-204ENST00000393546 IGLV3-10A0A075B6K4 115 aa19.57■□□□□ 0.72
PDLIM7-204ENST00000393546 ADAM23O75077 832 aa19.57■□□□□ 0.72
PDLIM7-204ENST00000393546 ALDH1A2O94788 518 aa19.57■□□□□ 0.72
PDLIM7-204ENST00000393546 APBB3O95704 486 aa19.57■□□□□ 0.72
PDLIM7-204ENST00000393546 NRG1Q02297 640 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-204ENST00000393546 NHLH1Q02575 133 aa19.57■□□□□ 0.72
PDLIM7-204ENST00000393546 ACAP1Q15027 740 aa19.57■□□□□ 0.72
PDLIM7-204ENST00000393546 EFHC2Q5JST6 749 aa19.57■□□□□ 0.72
PDLIM7-204ENST00000393546 HEATR6Q6AI08 1181 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms