RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 TMEM221A6NGB7 291 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 KCNN4O15554 427 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 IQCF3P0C7M6 154 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 ARSAP15289 507 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 GALK1P51570 392 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 PSMC1P62191 440 aaKnown RBP11.72□□□□□ -0.53
PDCD4-202ENST00000393104 GBE1Q04446 702 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 MAMDC4Q6UXC1 1216 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 SCARA5Q6ZMJ2 495 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 USP37Q86T82 979 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 WDR49Q8IV35 697 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 CPXCR1Q8N123 301 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 HSPBAP1Q96EW2 488 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 CNDP1Q96KN2 507 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 RILPQ96NA2 401 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 FCRL3Q96P31 734 aaPredicted RBP11.72□□□□□ -0.53
PDCD4-202ENST00000393104 SIKE1Q9BRV8 207 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 MIS12Q9H081 205 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 APPL1Q9UKG1 709 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 RAB26Q9ULW5 256 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 GNEQ9Y223 722 aaKnown RBP11.72□□□□□ -0.53
PDCD4-202ENST00000393104 TRIM64A6NGJ6 449 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 ARHGAP42A6NI28 874 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 TRIM64CA6NLI5 447 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 APRTP07741 180 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 OSBPP22059 807 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 GRM1Q13255 1194 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 OLIG2Q13516 323 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 DBN1Q16643 649 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 ANKDD1AQ495B1 522 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 C1QTNF12Q5T7M4 302 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 PACS1Q6VY07 963 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 AMIGO2Q86SJ2 522 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 RIOX2Q8IUF8 465 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 MCPH1Q8NEM0 835 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 TANKQ92844 425 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 APBB2Q92870 758 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 SLC35B4Q969S0 331 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 CALN1Q9BXU9 219 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 NRDE2Q9H7Z3 1164 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 PCDH18Q9HCL0 1135 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 XPNPEP3Q9NQH7 507 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 PIH1D1Q9NWS0 290 aaKnown RBP11.72□□□□□ -0.53
PDCD4-202ENST00000393104 SEPT9Q9UHD8 586 aaPredicted RBP11.72□□□□□ -0.53
PDCD4-202ENST00000393104 SCN1AP35498 2009 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 hCG_2014768A0A024R1R8 64 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 CLPTM1O96005 669 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 LTFP02788 710 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 STT3AP46977 705 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 STILQ15468 1287 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 PPP1R2P3Q6NXS1 205 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 CARM1Q86X55 608 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 TNS4Q8IZW8 715 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 RTKNQ9BST9 563 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 RSAD1Q9HA92 442 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 RHBDL2Q9NX52 303 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 DTNAQ9Y4J8 743 aa11.72□□□□□ -0.53
PDCD4-202ENST00000393104 MCF2LO15068 1137 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 GRID2O43424 1007 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 GCATO75600 419 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 PRDX6P30041 224 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 NAMPTP43490 491 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 GPR162Q16538 588 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 ZFYVE27Q5T4F4 411 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 MAP3K21Q5TCX8 1036 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 OLFML2BQ68BL8 750 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 HMBOX1Q6NT76 420 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 TEX13BQ9BXU2 312 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 MRPS26Q9BYN8 205 aaKnown RBP11.71□□□□□ -0.53
PDCD4-202ENST00000393104 C6orf203Q9P0P8 240 aaPredicted RBP11.71□□□□□ -0.53
PDCD4-202ENST00000393104 DMTF1Q9Y222 760 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 WDR27A2RRH5 827 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 TRIM64BA6NI03 449 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 MAFGO15525 162 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 MICAL2O94851 1124 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 KLHL2O95198 593 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 INHBBP09529 407 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 MAGEA8P43361 318 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 ATXN1P54253 815 aaKnown RBP11.71□□□□□ -0.53
PDCD4-202ENST00000393104 BAATQ14032 418 aaPredicted RBP11.71□□□□□ -0.53
PDCD4-202ENST00000393104 MTERF2Q49AM1 385 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.71□□□□□ -0.53
PDCD4-202ENST00000393104 TMEM259Q4ZIN3 620 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 Q6ZNX1 250 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 LSMEM2Q8N112 164 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 ATG4CQ96DT6 458 aa11.71□□□□□ -0.53
PDCD4-202ENST00000393104 DUS2Q9NX74 493 aaKnown RBP11.71□□□□□ -0.53
PDCD4-202ENST00000393104 PLXNA1Q9UIW2 1896 aa11.71□□□□□ -0.54
PDCD4-202ENST00000393104 PIK3R2O00459 728 aa11.71□□□□□ -0.54
PDCD4-202ENST00000393104 TOM1L1O75674 476 aa11.71□□□□□ -0.54
PDCD4-202ENST00000393104 ALDH2P05091 517 aa11.71□□□□□ -0.54
PDCD4-202ENST00000393104 SERPINE1P05121 402 aa11.71□□□□□ -0.54
PDCD4-202ENST00000393104 NR3C2P08235 984 aa11.71□□□□□ -0.54
PDCD4-202ENST00000393104 NDST2P52849 883 aa11.71□□□□□ -0.54
PDCD4-202ENST00000393104 HMGCS2P54868 508 aa11.71□□□□□ -0.54
PDCD4-202ENST00000393104 ABCE1P61221 599 aaKnown RBP11.71□□□□□ -0.54
PDCD4-202ENST00000393104 YBX1P67809 324 aaKnown RBP11.71□□□□□ -0.54
PDCD4-202ENST00000393104 IRF9Q00978 393 aa11.71□□□□□ -0.54
PDCD4-202ENST00000393104 PKDCCQ504Y2 493 aa11.71□□□□□ -0.54
PDCD4-202ENST00000393104 FASTKD5Q7L8L6 764 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms