RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 EXOC4Q96A65 974 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 TTC17Q96AE7 1141 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 TLR10Q9BXR5 811 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 FRMD8P1Q9BZ68 369 aaPredicted RBP13.68□□□□□ -0.22
USP44-202ENST00000393091 CATSPERBQ9H7T0 1116 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 SMPD4Q9NXE4 827 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 PLXND1Q9Y4D7 1925 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 USP27XA6NNY8 438 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 H3BRJ5 948 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 NPC1O15118 1278 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 BUB1O43683 1085 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 LRIG2O94898 1065 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 TNFRSF4P43489 277 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 AMPD2Q01433 879 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 ENPP2Q13822 863 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 CA9Q16790 459 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 CDO1Q16878 200 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 TMCO4Q5TGY1 634 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 LRRC31Q6UY01 552 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 RFX8Q6ZV50 586 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 C14orf80Q86SX3 495 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 RNF135Q8IUD6 432 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.68□□□□□ -0.22
USP44-202ENST00000393091 IGSF8Q969P0 613 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 LINC00597Q9H2U6 94 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 CWC15Q9P013 229 aaKnown RBP13.68□□□□□ -0.22
USP44-202ENST00000393091 GUCA1BQ9UMX6 200 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 ILVBLA1L0T0 632 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 FAM72CH0Y354 149 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 LUC7L3O95232 432 aaKnown RBP13.67□□□□□ -0.22
USP44-202ENST00000393091 YBEYP58557 167 aaPredicted RBP13.67□□□□□ -0.22
USP44-202ENST00000393091 FAM72AQ5TYM5 149 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 FAM72DQ6L9T8 149 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 CXorf57Q6NSI4 855 aaKnown RBP13.67□□□□□ -0.22
USP44-202ENST00000393091 FAM72BQ86X60 149 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 YAF2Q8IY57 180 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 UBL4BQ8N7F7 174 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 MYEOVQ96EZ4 313 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 CSPG4P5Q96PW8 444 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 ACE2Q9BYF1 805 aaPredicted RBP13.67□□□□□ -0.22
USP44-202ENST00000393091 LRRC19Q9H756 370 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 CKAP5Q14008 2032 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 SLC34A2O95436 690 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 ZFXP17010 805 aaPredicted RBP13.67□□□□□ -0.22
USP44-202ENST00000393091 OPRD1P41143 372 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 RWDD2BP57060 319 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 CPNE8Q86YQ8 564 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 ZWILCHQ9H900 591 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 WNT6Q9Y6F9 365 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 MACROD2A1Z1Q3 448 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 TIMM44O43615 452 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 CYBBP04839 570 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 HSF5Q4G112 596 aaPredicted RBP13.67□□□□□ -0.22
USP44-202ENST00000393091 ANKRD20A8PQ5CZ79 823 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 PEX26Q7Z412 305 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 SYNPOQ8N3V7 929 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 RPGRIP1Q96KN7 1286 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 RNF157Q96PX1 679 aa13.67□□□□□ -0.22
USP44-202ENST00000393091 GOLGA6L7A0A1B0GV03 622 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 KIF2AO00139 706 aaPredicted RBP13.66□□□□□ -0.22
USP44-202ENST00000393091 MAN2B1O00754 1011 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 KIF5CO60282 957 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 ARSAP15289 507 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 GDI1P31150 447 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 SGSHP51688 502 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 KLF1Q13351 362 aaPredicted RBP13.66□□□□□ -0.22
USP44-202ENST00000393091 TMEM196Q5HYL7 178 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 DCAF12L1Q5VU92 463 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 RAP1GAP2Q684P5 730 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 TMEM25Q86YD3 366 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 RNF34Q969K3 372 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 TMA16Q96EY4 203 aaKnown RBP13.66□□□□□ -0.22
USP44-202ENST00000393091 PBKQ96KB5 322 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 BRD8Q9H0E9 1235 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 MAGEH1Q9H213 219 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 LZTFL1Q9NQ48 299 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.66□□□□□ -0.22
USP44-202ENST00000393091 hCG_1818297A0A087WSY0 165 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 IRF1P10914 325 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 TGM2P21980 687 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 GJA4P35212 333 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 ETFBP38117 255 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 NR2C2P49116 596 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 EIF4HQ15056 248 aaKnown RBP13.66□□□□□ -0.22
USP44-202ENST00000393091 PARP15Q460N3 678 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 TFDP3Q5H9I0 405 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 SPOCD1Q6ZMY3 1216 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 LGI2Q8N0V4 545 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 PQLC3Q8N755 202 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 RSAD2Q8WXG1 361 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 ARHGEF4Q9NR80 690 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 TMPRSS4Q9NRS4 437 aa13.66□□□□□ -0.22
USP44-202ENST00000393091 OTOL1A6NHN0 477 aaPredicted RBP13.65□□□□□ -0.22
USP44-202ENST00000393091 SPOPO43791 374 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 HNRNPLP14866 589 aaKnown RBP eCLIP13.65□□□□□ -0.22
USP44-202ENST00000393091 MAGEA9P43362 315 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 ZXDAP98168 799 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 LY6G5CQ5SRR4 150 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 ZNF572Q7Z3I7 529 aaPredicted RBP13.65□□□□□ -0.22
USP44-202ENST00000393091 CHSY1Q86X52 802 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms