RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 ZNF567Q8N184 647 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 SIX6OS1Q8N1H7 587 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 SYT17Q9BSW7 474 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 PRDM12Q9H4Q4 367 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 STN1Q9H668 368 aaKnown RBP11.09□□□□□ -0.63
NLRP3-205ENST00000391827 DENND2DQ9H6A0 471 aaPredicted RBP11.09□□□□□ -0.63
NLRP3-205ENST00000391827 PIGVQ9NUD9 493 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 SLC38A7Q9NVC3 462 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 THAP1Q9NVV9 213 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 RRN3Q9NYV6 651 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 C17orf102A2RUQ5 167 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 EEF2KO00418 725 aaKnown RBP11.09□□□□□ -0.63
NLRP3-205ENST00000391827 FYNP06241 537 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 PYGLP06737 847 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 FAM200BP0CF97 657 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 GNAT1P11488 350 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 TKTL1P51854 596 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 AP1B1Q10567 949 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 SPANXN3Q5MJ09 141 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 SYPL2Q5VXT5 272 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 ARMC3Q5W041 872 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 WSCD1Q658N2 575 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 CCDC33Q8N5R6 958 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 YIPF3Q9GZM5 350 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 DCLRE1BQ9H816 532 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 WDR6Q9NNW5 1121 aaKnown RBP11.09□□□□□ -0.63
NLRP3-205ENST00000391827 CNGB3Q9NQW8 809 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 NKX1-2Q9UD57 310 aaPredicted RBP11.09□□□□□ -0.63
NLRP3-205ENST00000391827 DCDC2Q9UHG0 476 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 SORCS3Q9UPU3 1222 aa11.09□□□□□ -0.63
NLRP3-205ENST00000391827 HBS1LQ9Y450 684 aaKnown RBP11.09□□□□□ -0.63
NLRP3-205ENST00000391827 ERI2A8K979 691 aaKnown RBP11.08□□□□□ -0.63
NLRP3-205ENST00000391827 CLDN5O00501 218 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 IGHA2P01877 340 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 MGAT1P26572 445 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 PSMB4P28070 264 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 MAGEA12P43365 314 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 LHX1P48742 406 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 DAOAP59103 153 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 PRAMEF19Q5SWL8 479 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 KIAA0319Q5VV43 1072 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 MBLAC2Q68D91 279 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 NDRG1Q92597 394 aaKnown RBP11.08□□□□□ -0.63
NLRP3-205ENST00000391827 PRR11Q96HE9 360 aaPredicted RBP11.08□□□□□ -0.63
NLRP3-205ENST00000391827 NUDCD1Q96RS6 583 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 NMUR2Q9GZQ4 415 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 CRTAC1Q9NQ79 661 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 XPNPEP3Q9NQH7 507 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 PAPOLBQ9NRJ5 636 aaKnown RBP11.08□□□□□ -0.63
NLRP3-205ENST00000391827 ADAM28Q9UKQ2 775 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 EMCNQ9ULC0 261 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 LRRC42Q9Y546 428 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 PTCH2Q9Y6C5 1203 aa11.08□□□□□ -0.63
NLRP3-205ENST00000391827 GYG2O15488 501 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 MTSS1O43312 755 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 POLBP06746 335 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 NDUFV1P49821 464 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 PPIDQ08752 370 aaKnown RBP11.08□□□□□ -0.64
NLRP3-205ENST00000391827 STX3Q13277 289 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 MDH1BQ5I0G3 518 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 TAF2Q6P1X5 1199 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 ARID3BQ8IVW6 561 aaPredicted RBP11.08□□□□□ -0.64
NLRP3-205ENST00000391827 ATP2A3Q93084 1043 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 ZNF570Q96NI8 536 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 GORASP1Q9BQQ3 440 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 ZNF408Q9H9D4 720 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 KRT82Q9NSB4 513 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 TAS2R1Q9NYW7 299 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 FLRT1Q9NZU1 646 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 LMCD1Q9NZU5 365 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 FBXW11Q9UKB1 542 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 NR2E3Q9Y5X4 410 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 PLIN3O60664 434 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 AP2A1O95782 977 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 ITGA2BP08514 1039 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 ESRRAP11474 423 aaPredicted RBP11.08□□□□□ -0.64
NLRP3-205ENST00000391827 IFRD2Q12894 506 aaPredicted RBP11.08□□□□□ -0.64
NLRP3-205ENST00000391827 PDE1CQ14123 709 aaPredicted RBP11.08□□□□□ -0.64
NLRP3-205ENST00000391827 CASC4Q6P4E1 433 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 HFE2Q6ZVN8 426 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 FAM35AQ86V20 835 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 RBM12BQ8IXT5 1001 aaKnown RBP11.08□□□□□ -0.64
NLRP3-205ENST00000391827 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.08□□□□□ -0.64
NLRP3-205ENST00000391827 RNF169Q8NCN4 708 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 B4GALNT2Q8NHY0 566 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 CPNE1Q99829 537 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 TSPYL2Q9H2G4 693 aaPredicted RBP11.08□□□□□ -0.64
NLRP3-205ENST00000391827 TMPRSS4Q9NRS4 437 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 SYBUQ9NX95 663 aa11.08□□□□□ -0.64
NLRP3-205ENST00000391827 TPP1O14773 563 aa11.07□□□□□ -0.64
NLRP3-205ENST00000391827 NRP1O14786 923 aa11.07□□□□□ -0.64
NLRP3-205ENST00000391827 CREB3O43889 395 aa11.07□□□□□ -0.64
NLRP3-205ENST00000391827 MAGEC1O60732 1142 aa11.07□□□□□ -0.64
NLRP3-205ENST00000391827 SERPINA6P08185 405 aa11.07□□□□□ -0.64
NLRP3-205ENST00000391827 ACAT1P24752 427 aaKnown RBP11.07□□□□□ -0.64
NLRP3-205ENST00000391827 PTPN3P26045 913 aa11.07□□□□□ -0.64
NLRP3-205ENST00000391827 GP5P40197 560 aa11.07□□□□□ -0.64
NLRP3-205ENST00000391827 RAP1GDS1P52306 607 aa11.07□□□□□ -0.64
NLRP3-205ENST00000391827 SESN2P58004 480 aaPredicted RBP11.07□□□□□ -0.64
NLRP3-205ENST00000391827 GRTP1Q5TC63 336 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms