RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 SATB1Q01826 763 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 SRSF5Q13243 272 aaKnown RBP7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 NR1I3Q14994 352 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 STILQ15468 1287 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 FXNQ16595 210 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 TPD52L1Q16890 204 aaPredicted RBP7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 ZSCAN23Q3MJ62 389 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 TTC39BQ5VTQ0 682 aaPredicted RBP7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 BSPRYQ5W0U4 402 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 FSTL4Q6MZW2 842 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 MSANTD2Q6P1R3 559 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 PKN3Q6P5Z2 889 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 CEP68Q76N32 757 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 C12orf40Q86WS4 652 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 CREBRFQ8IUR6 639 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 FMNL3Q8IVF7 1028 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 BBS7Q8IWZ6 715 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 FAM217AQ8IXS0 508 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 C12orf50Q8NA57 414 aaPredicted RBP7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 TTC8Q8TAM2 541 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 ZNF669Q96BR6 464 aaPredicted RBP7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 STK33Q9BYT3 514 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 TTYH3Q9C0H2 523 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 LHX5Q9H2C1 402 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 C8orf33Q9H7E9 229 aaPredicted RBP7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 CBX8Q9HC52 389 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 CNGB3Q9NQW8 809 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 TLR8Q9NR97 1041 aaKnown RBP7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 CFAP97Q9P2B7 532 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 NOCTQ9UK39 431 aaKnown RBP7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 HCN2Q9UL51 889 aa7.34□□□□□ -1.23
TRAV12-3-201ENST00000390442 A0A1B0GTH6 734 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 E2F8A0AVK6 867 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 M0QYV0 167 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 PIK3R2O00459 728 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 IGLV3-25P01717 112 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 MBL2P11226 248 aaPredicted RBP7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 IMPDH2P12268 514 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 KRT5P13647 590 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 CYP11B1P15538 503 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 CNR2P34972 360 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 ATP5C1P36542 298 aaKnown RBP7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 ZNF165P49910 485 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 PDE6CP51160 858 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 GALK1P51570 392 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 YWHAGP61981 247 aaKnown RBP eCLIP7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 PITX1P78337 314 aaPredicted RBP7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 PDCLQ13371 301 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 LRRC32Q14392 662 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 PDGFRLQ15198 375 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 DHCR24Q15392 516 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 SYCP1Q15431 976 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 TAF5Q15542 800 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 NFKBIBQ15653 356 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 ITPRIPL2Q3MIP1 535 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 PTPN20Q4JDL3 420 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 N4BP2L1Q5TBK1 243 aaPredicted RBP7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 OTUD1Q5VV17 481 aaPredicted RBP7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 SYPL2Q5VXT5 272 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 E4F1Q66K89 784 aaPredicted RBP7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 RNF43Q68DV7 783 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 HEATR6Q6AI08 1181 aaKnown RBP7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 SFTPA1Q8IWL2 248 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 FAM169BQ8N8A8 192 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 IRGQQ8WZA9 623 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 FAM81BQ96LP2 452 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 CPXM1Q96SM3 734 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 PCDHB18PQ96TA0 734 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 LSM14BQ9BX40 385 aaKnown RBP7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 RBM12Q9NTZ6 932 aaKnown RBP7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 DUS2Q9NX74 493 aaKnown RBP7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 CALCOCO1Q9P1Z2 691 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 STOML2Q9UJZ1 356 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 LAMA1P25391 3075 aa7.33□□□□□ -1.24
TRAV12-3-201ENST00000390442 CEP295Q9C0D2 2601 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 SPAG17Q6Q759 2223 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 SDK1Q7Z5N4 2213 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 E5RJQ4 531 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 I6L893 689 aaPredicted RBP7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 K7EQS6 105 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 TRIM24O15164 1050 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 EGFP01133 1207 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 ERBB2P04626 1255 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 CYP1A1P04798 512 aaPredicted RBP7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 PROS1P07225 676 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 LCP1P13796 627 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 GABRB2P47870 512 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 SLC6A11P48066 632 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 RNF144AP50876 292 aaPredicted RBP7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 SHC2P98077 582 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 FMO1Q01740 532 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 PTP4A2Q12974 167 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 PON2Q15165 354 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 SF3A2Q15428 464 aaKnown RBP7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 LY6G5CQ5SRR4 150 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 PEAR1Q5VY43 1037 aaPredicted RBP7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 TRNP1Q6NT89 227 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 CCDC81Q6ZN84 652 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 Q6ZS52 159 aa7.32□□□□□ -1.24
TRAV12-3-201ENST00000390442 BEND5Q7L4P6 421 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms