RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 SNAI1O95863 264 aaPredicted RBP18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 NCF2P19878 526 aaPredicted RBP18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 ZNF143P52747 638 aaPredicted RBP18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 CNGA3Q16281 694 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 VWA5B1Q5TIE3 1220 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 C16orf46Q6P387 395 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 DARS2Q6PI48 645 aaKnown RBP18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 PPTC7Q8NI37 304 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 NGRNQ9NPE2 291 aaKnown RBP18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 ASNSD1Q9NWL6 643 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 SNTG2Q9NY99 539 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 EFR3BQ9Y2G0 817 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 DNAJC16Q9Y2G8 782 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 SCN1AP35498 2009 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 APOC4-APOC2K7ER74 178 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 APOC2P02655 101 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 PIM1P11309 404 aaPredicted RBP18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 TFE3P19532 575 aaPredicted RBP18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 GPD1P21695 349 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 ATICP31939 592 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 RBP5P82980 135 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 SMAD1Q15797 465 aaKnown RBP18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 GOLGA7BQ2TAP0 167 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 TTC39BQ5VTQ0 682 aaPredicted RBP18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 LRRC8BQ6P9F7 803 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 NDUFAF2Q8N183 169 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 C18orf25Q96B23 403 aaPredicted RBP18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 CYP3A43Q9HB55 503 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 XAB2Q9HCS7 855 aaKnown RBP18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 DICER1Q9UPY3 1922 aaKnown RBP18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 BOLA2-SMG1P6H3BVE0 249 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 DNAJA2O60884 412 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 GABBR2O75899 941 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 P4HA1P13674 534 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 SLC5A2P31639 672 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 EMP3P54852 163 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 PLOD1Q02809 727 aaPredicted RBP18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 CBX3Q13185 183 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 SNAPC2Q13487 334 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 DPYSL3Q14195 570 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 SLC26A11Q86WA9 606 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 GALNT4Q8N4A0 578 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 TTC13Q8NBP0 860 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 SLC10A4Q96EP9 437 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 NT5C1AQ9BXI3 368 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 VRTNQ9H8Y1 702 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 HEY1Q9Y5J3 304 aa18.17■□□□□ 0.5
SQSTM1-202ENST00000389805 H3BNX3 289 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 ADCY6O43306 1168 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 CCNT2O60583 730 aaKnown RBP18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 AOC1P19801 751 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 EPHX2P34913 555 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 GRIK4Q16099 956 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 CA9Q16790 459 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 TTC30AQ86WT1 665 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 EIF2AQ9BY44 585 aaKnown RBP18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 EPB41L1Q9H4G0 881 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 SIRPGQ9P1W8 387 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 TUBGCP4Q9UGJ1 667 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 CIDEBQ9UHD4 219 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 PDHXO00330 501 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 NDC80O14777 642 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 MCF2LO15068 1137 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 IL1BP01584 269 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 SNRPAP09012 282 aaKnown RBP18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 YBX3P16989 372 aaKnown RBP eCLIP18.16■□□□□ 0.54e-6■□□□□ 11.2
SQSTM1-202ENST00000389805 POU5F1BQ06416 359 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 DCTN2Q13561 401 aaKnown RBP18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 CCDC14Q49A88 953 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 PPP6R3Q5H9R7 873 aaPredicted RBP18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 LCLAT1Q6UWP7 414 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 ZNF778Q96MU6 729 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 CNPY3Q9BT09 278 aa18.16■□□□□ 0.5
SQSTM1-202ENST00000389805 KRT37O76014 449 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 SRGAP2BP0DMP2 458 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 SMPD1P17405 629 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 ATXN1P54253 815 aaKnown RBP18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 RPL10AP62906 217 aaKnown RBP18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 MYBPC1Q00872 1141 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 PPIDQ08752 370 aaKnown RBP18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 C6orf52Q5T4I8 152 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 IFNLR1Q8IU57 520 aaPredicted RBP18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 C7orf31Q8N865 590 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 SENP6Q9GZR1 1112 aaPredicted RBP18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 KATNBL1Q9H079 304 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 GJD2Q9UKL4 321 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 APOBEC2Q9Y235 224 aaKnown RBP18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 H7C0C1 242 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 PRPSAP2O60256 369 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 SIN3BO75182 1162 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 RFPL1O75677 317 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 CRTAMO95727 393 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 IL4RP24394 825 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 HOXA11P31270 313 aaPredicted RBP18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 ATP5OP48047 213 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 INCA1Q0VD86 236 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 PDK1Q15118 436 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 KLHL35Q6PF15 583 aa18.15■□□□□ 0.5
SQSTM1-202ENST00000389805 FRMD7Q6ZUT3 714 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms