RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 IGSF8Q969P0 613 aa-2.02□□□□□ -2.73
RNU6-1340P-201ENST00000384438 GAL3ST3Q96A11 431 aa-2.02□□□□□ -2.73
RNU6-1340P-201ENST00000384438 ALG8Q9BVK2 526 aa-2.02□□□□□ -2.73
RNU6-1340P-201ENST00000384438 CAPS2Q9BXY5 557 aa-2.02□□□□□ -2.73
RNU6-1340P-201ENST00000384438 PANK3Q9H999 370 aa-2.02□□□□□ -2.73
RNU6-1340P-201ENST00000384438 ARHGEF3Q9NR81 526 aa-2.02□□□□□ -2.73
RNU6-1340P-201ENST00000384438 TMEM45AQ9NWC5 275 aa-2.02□□□□□ -2.73
RNU6-1340P-201ENST00000384438 POGKQ9P215 609 aa-2.02□□□□□ -2.73
RNU6-1340P-201ENST00000384438 ANAPC4Q9UJX5 808 aa-2.02□□□□□ -2.73
RNU6-1340P-201ENST00000384438 MTCL1Q9Y4B5 1905 aaKnown RBP-2.02□□□□□ -2.73
RNU6-1340P-201ENST00000384438 TECTAO75443 2155 aa-2.02□□□□□ -2.73
RNU6-1340P-201ENST00000384438 CCDC168Q8NDH2 2452 aa-2.02□□□□□ -2.73
RNU6-1340P-201ENST00000384438 LRP4O75096 1905 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 ALPK3Q96L96 1907 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 FREM1Q5H8C1 2179 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 CADP27708 2225 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 IGHV4OR15-8A0A075B7B6 117 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 A0A0G2JRQ6 117 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 NPIPB11E5RHQ5 1161 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 SOCS3O14543 225 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 RGS13O14921 159 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 AURKAO14965 403 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 GCATO75600 419 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 MPIG6BO95866 241 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 THY1P04216 161 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 TRIM49P0CI25 452 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 TRIM49CP0CI26 452 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 CETPP11597 493 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 NAGAP17050 411 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 EIF4BP23588 611 aaKnown RBP-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 CDH5P33151 784 aaPredicted RBP-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 NUDT1P36639 197 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 MECP2P51608 486 aaKnown RBP-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 BMXP51813 675 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 HSF1Q00613 529 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 CNTN2Q02246 1040 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 FOXO1Q12778 655 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 TRAF1Q13077 416 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 SERTAD2Q14140 314 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 CTR9Q6PD62 1173 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 LCA10Q71F78 164 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 CEP68Q76N32 757 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 POC5Q8NA72 575 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 RNF169Q8NCN4 708 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 C7orf57Q8NEG2 295 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 DDHD1Q8NEL9 900 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 PPHLN1Q8NEY8 458 aaKnown RBP-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 OR13A1Q8NGR1 328 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 SNX29Q8TEQ0 813 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 SH3TC2Q8TF17 1288 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 SLC6A18Q96N87 628 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 SNX18Q96RF0 628 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 KIF2CQ99661 725 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 ZNF577Q9BSK1 485 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 AMNQ9BXJ7 453 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 EHD3Q9NZN3 535 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 STOX2Q9P2F5 926 aaPredicted RBP-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 KLHL8Q9P2G9 620 aaPredicted RBP-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 USP25Q9UHP3 1055 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 FOXD3Q9UJU5 478 aaPredicted RBP-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 TSPAN16Q9UKR8 245 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 PCDHB12Q9Y5F1 795 aa-2.03□□□□□ -2.73
RNU6-1340P-201ENST00000384438 RIF1Q5UIP0 2472 aaKnown RBP-2.03□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TRBV23OR9-2A0A075B6M9 112 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 NPHP3-ACAD11A0A0J9YXS1 232 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 VPS37CA5D8V6 355 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 FOXO6A8MYZ6 492 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CHURC1-FNTBB4DL54 471 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 C16orf97H3BN30 126 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 K7N7A8 449 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 EYA2O00167 538 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SLC27A2O14975 620 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SHOXO15266 292 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 MAGEB2O15479 319 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PAGE1O75459 146 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TOXO94900 526 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TACC2O95359 2948 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 GJB6O95452 261 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 AIFM1O95831 613 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 IFNA2P01563 188 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 AFPP02771 609 aaKnown RBP-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 RHOP08100 348 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CD63P08962 238 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PAMP19021 973 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 HNF4AP41235 474 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 MAGEB1P43366 347 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CDH15P55291 814 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CLDN10P78369 228 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SP2Q02086 613 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ITIH3Q06033 890 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ITGADQ13349 1161 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PDE7AQ13946 482 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ITPR1Q14643 2758 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 LRRC14Q15048 493 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 FAM187BQ17R55 369 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 AP5B1Q2VPB7 878 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TUBB8Q3ZCM7 444 aa-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TTC31Q49AM3 519 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 FASTKD1Q53R41 847 aaKnown RBP-2.04□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ADAMTSL4-AS1Q5T5F5 129 aa-2.04□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms