RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 PPP2R3CQ969Q6 453 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 PCYT2Q99447 389 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 EFHD1Q9BUP0 239 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 KLHL4Q9C0H6 718 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 ACSS2Q9NR19 701 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 ZDHHC18Q9NUE0 388 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 DMAC2Q9NW81 257 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 HMGXB4Q9UGU5 601 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 MYH15Q9Y2K3 1946 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 DCXO43602 365 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 LSM8O95777 96 aaKnown RBP19.32■□□□□ 0.68
CSPG5-202ENST00000383738 CCND3P30281 292 aaPredicted RBP19.32■□□□□ 0.68
CSPG5-202ENST00000383738 ABCG1P45844 678 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 CLCNKBP51801 687 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 ADARP55265 1226 aaKnown RBP19.32■□□□□ 0.68
CSPG5-202ENST00000383738 PKNOX1P55347 436 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 PEX6Q13608 980 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 KBTBD12Q3ZCT8 623 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 DBF4BQ8NFT6 615 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 PRR23AA6NEV1 266 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 AKAP10O43572 662 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 URODP06132 367 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 FGFR3P22607 806 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 LRMDAQ9H2I8 198 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 MAN1C1Q9NR34 630 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 VANGL2Q9ULK5 521 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 UBR2Q8IWV8 1755 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 MBL2P11226 248 aaPredicted RBP19.32■□□□□ 0.68
CSPG5-202ENST00000383738 USP46P62068 366 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 MRPS22P82650 360 aaKnown RBP19.32■□□□□ 0.68
CSPG5-202ENST00000383738 PDK4Q16654 411 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 PPIL6Q8IXY8 311 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 CADM1Q9BY67 442 aaKnown RBP19.32■□□□□ 0.68
CSPG5-202ENST00000383738 ELOVL4Q9GZR5 314 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 SEMA6AQ9H2E6 1030 aa19.32■□□□□ 0.68
CSPG5-202ENST00000383738 MYO5AQ9Y4I1 1855 aaKnown RBP19.31■□□□□ 0.68
CSPG5-202ENST00000383738 CCDC189A1A4V9 331 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 SEPT4O43236 478 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 ANPEPP15144 967 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 NEK3P51956 506 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 CENPCQ03188 943 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 PDK1Q15118 436 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 MAPRE1Q15691 268 aaKnown RBP19.31■□□□□ 0.68
CSPG5-202ENST00000383738 CCNG2Q16589 344 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 ZNF572Q7Z3I7 529 aaPredicted RBP19.31■□□□□ 0.68
CSPG5-202ENST00000383738 TRABD2AQ86V40 505 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 VPS39Q96JC1 886 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 SRPK1Q96SB4 655 aaKnown RBP19.31■□□□□ 0.68
CSPG5-202ENST00000383738 DOLKQ9UPQ8 538 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 ANGPTL3Q9Y5C1 460 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 PSTPIP1O43586 416 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 CDK16Q00536 496 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 EXD1Q8NHP7 514 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 TFB1MQ8WVM0 346 aaKnown RBP19.31■□□□□ 0.68
CSPG5-202ENST00000383738 TAGLN3Q9UI15 199 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 SH3BP1Q9Y3L3 701 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 LRG1P02750 347 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 DRG2P55039 364 aaKnown RBP19.31■□□□□ 0.68
CSPG5-202ENST00000383738 KIF19Q2TAC6 998 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 ITPRIPL1Q6GPH6 555 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 TSHZ1Q6ZSZ6 1077 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 SAPCD2Q86UD0 394 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 ZNF786Q8N393 782 aa19.31■□□□□ 0.68
CSPG5-202ENST00000383738 LYNP07948 512 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 ECHS1P30084 290 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 MARSP56192 900 aaKnown RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 CRADDP78560 199 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 SLC6A3Q01959 620 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 TRMT5Q32P41 509 aaKnown RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 FASTKD1Q53R41 847 aaKnown RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 RBM44Q6ZP01 1051 aaKnown RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 DDX53Q86TM3 631 aaKnown RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 CYGBQ8WWM9 190 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 ZIC5Q96T25 663 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 HIPK3Q9H422 1215 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 SNX13Q9Y5W8 968 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 MYH1P12882 1939 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 AKAP11Q9UKA4 1901 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 EDIL3O43854 480 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 ZNF189O75820 626 aaPredicted RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 PCYT1AP49585 367 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 BLOC1S5Q8TDH9 187 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 ZBED3Q96IU2 234 aaPredicted RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 PAIP1Q9H074 479 aaKnown RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 ING2Q9H160 280 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 PLOD1Q02809 727 aaPredicted RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 NFE2Q16621 373 aaPredicted RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 NTPCRQ9BSD7 190 aaKnown RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 TKTL2Q9H0I9 626 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 UPF3AQ9H1J1 476 aaKnown RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 COPS7BQ9H9Q2 264 aaPredicted RBP19.3■□□□□ 0.68
CSPG5-202ENST00000383738 RPS6KL1Q9Y6S9 549 aa19.3■□□□□ 0.68
CSPG5-202ENST00000383738 SMIM35A0A1B0GVV1 85 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 H0Y626 953 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 DNALI1O14645 258 aaPredicted RBP19.29■□□□□ 0.68
CSPG5-202ENST00000383738 AVILO75366 819 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 RTN3O95197 1032 aaPredicted RBP19.29■□□□□ 0.68
CSPG5-202ENST00000383738 RPL17P18621 184 aaKnown RBP19.29■□□□□ 0.68
CSPG5-202ENST00000383738 GRM5P41594 1212 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 RAB27AP51159 221 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms