RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 FYNP06241 537 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 SRPRAP08240 638 aaKnown RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 HLA-EP13747 358 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 SLC6A4P31645 630 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 SIM1P81133 766 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 GRIK2Q13002 908 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 SLC12A1Q13621 1099 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 TEAD4Q15561 434 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 TPD52L1Q16890 204 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 TTC39BQ5VTQ0 682 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 ZNF776Q68DI1 518 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 USP30Q70CQ3 517 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 FAM114A1Q8IWE2 563 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 ATP6V0D2Q8N8Y2 350 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 ADAM33Q9BZ11 813 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 MIR1-1HGQ9H1L0 117 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 PRSS16Q9NQE7 514 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 KIAA1522Q9P206 1035 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 STIM2Q9P246 746 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 WASF3Q9UPY6 502 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 NAALADL1Q9UQQ1 740 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 NCKAP1Q9Y2A7 1128 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 NEUROG3Q9Y4Z2 214 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 PCDHB9Q9Y5E1 797 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 GOLGA6L7A0A1B0GV03 622 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 TARSL2A2RTX5 802 aaKnown RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 E5RJQ4 531 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 PAPSS1O43252 624 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 LUC7L3O95232 432 aaKnown RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 CD59P13987 128 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 MAOBP27338 520 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 CD70P32970 193 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 NNMTP40261 264 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 SGSHP51688 502 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 AFF3P51826 1226 aaKnown RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 RPS14P62263 151 aaKnown RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 CDK17Q00537 523 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 PTK2Q05397 1052 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 SULT2A1Q06520 285 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 PDCLQ13371 301 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 HNRNPA1L2Q32P51 320 aaKnown RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 EFHC1Q5JVL4 640 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 NADSYN1Q6IA69 706 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 DENND1BQ6P3S1 775 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 UNQ6494/PRO21346Q6UXR6 183 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 TAC4Q86UU9 113 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 CREBRFQ8IUR6 639 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 ZCCHC9Q8N567 271 aaKnown RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 LMLNQ96KR4 655 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 FSCN3Q9NQT6 498 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 PCDHGC3Q9UN70 934 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 CEP83Q9Y592 693 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 PCDHGB2Q9Y5G2 931 aa13.45□□□□□ -0.26
RPAIN-202ENST00000381208 KMT2BQ9UMN6 2715 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-202ENST00000381208 KNL1Q8NG31 2342 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 PCDH15Q96QU1 1955 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 F5H5T6 163 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 HSF2BPO75031 334 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 SEMA4FO95754 770 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 TRUB2O95900 331 aaKnown RBP13.44□□□□□ -0.26
RPAIN-202ENST00000381208 MOCS2O96007 188 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-202ENST00000381208 IGLV3-25P01717 112 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 ABCB4P21439 1286 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 CCR1P32246 355 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 USP8P40818 1118 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 CSKP41240 450 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 MATKP42679 507 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 MTIF2P46199 727 aaKnown RBP13.44□□□□□ -0.26
RPAIN-202ENST00000381208 BPIFB4P59827 614 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 RPS24P62847 133 aaKnown RBP13.44□□□□□ -0.26
RPAIN-202ENST00000381208 SUZ12Q15022 739 aaKnown RBP13.44□□□□□ -0.26
RPAIN-202ENST00000381208 DCAF6Q58WW2 860 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 RNF219Q5W0B1 726 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-202ENST00000381208 CHSY1Q86X52 802 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 CARNMT1Q8N4J0 409 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 SHC3Q92529 594 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 PRICKLE1Q96MT3 831 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-202ENST00000381208 CRACR2AQ9BSW2 395 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 SCNM1Q9BWG6 230 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 NUCKS1Q9H1E3 243 aaKnown RBP13.44□□□□□ -0.26
RPAIN-202ENST00000381208 RSPH9Q9H1X1 276 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-202ENST00000381208 CHMP5Q9NZZ3 219 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 EIF2B4Q9UI10 523 aaKnown RBP13.44□□□□□ -0.26
RPAIN-202ENST00000381208 DACH1Q9UI36 760 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-202ENST00000381208 USP24Q9UPU5 2620 aa13.44□□□□□ -0.26
RPAIN-202ENST00000381208 EDDM13A0A1B0GTR0 161 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 KCNU1A8MYU2 1149 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 CALCAP01258 141 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 KRT9P35527 623 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 GRIA4P48058 902 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 EIF4EBP2Q13542 120 aaPredicted RBP13.43□□□□□ -0.26
RPAIN-202ENST00000381208 TRIP6Q15654 476 aaKnown RBP13.43□□□□□ -0.26
RPAIN-202ENST00000381208 CAMK4Q16566 473 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 MAN2A1Q16706 1144 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 ARHGAP44Q17R89 818 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 ZC3H12AQ5D1E8 599 aaKnown RBP13.43□□□□□ -0.26
RPAIN-202ENST00000381208 RABGAP1LQ5R372 815 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 SYPL2Q5VXT5 272 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms