RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 MCF2LO15068 1137 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 LIASO43766 372 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 CHKAP35790 457 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 COILP38432 576 aaPredicted RBP21.05■□□□□ 0.96
TSSC4-203ENST00000380996 MTHFRP42898 656 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 LMNB2Q03252 620 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 BYSLQ13895 437 aaKnown RBP21.05■□□□□ 0.96
TSSC4-203ENST00000380996 NOMO1Q15155 1222 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 C5orf22Q49AR2 442 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 GLE1Q53GS7 698 aaKnown RBP21.05■□□□□ 0.96
TSSC4-203ENST00000380996 TEX35Q5T0J7 233 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 CCDC137Q6PK04 289 aaKnown RBP21.05■□□□□ 0.96
TSSC4-203ENST00000380996 MAATS1Q7Z4T9 603 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 NPAS3Q8IXF0 933 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 CCDC105Q8IYK2 499 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 ZSCAN18Q8TBC5 510 aaPredicted RBP21.05■□□□□ 0.96
TSSC4-203ENST00000380996 GRK7Q8WTQ7 553 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 SAE1Q9UBE0 346 aaPredicted RBP21.05■□□□□ 0.96
TSSC4-203ENST00000380996 PCYOX1Q9UHG3 505 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 NEU3Q9UQ49 428 aa21.05■□□□□ 0.96
TSSC4-203ENST00000380996 PECAM1P16284 738 aaPredicted RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 DLX2Q07687 328 aaPredicted RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 SNX1Q13596 522 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 TTC39BQ5VTQ0 682 aaPredicted RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 C8orf74Q6P047 294 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 NPNTQ6UXI9 565 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 GET4Q7L5D6 327 aaPredicted RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 CELF5Q8N6W0 485 aaKnown RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 RTL3Q8N8U3 475 aaKnown RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 MYRIPQ8NFW9 859 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 ATL2Q8NHH9 583 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 FGF13Q92913 245 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 NKD2Q969F2 451 aaPredicted RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 IGSF8Q969P0 613 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 CCL26Q9Y258 94 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 PRRC2BQ5JSZ5 2229 aaKnown RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 TYW5A2RUC4 315 aaKnown RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 NCAM2O15394 837 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 PRAMEF12O95522 483 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 SLC6A4P31645 630 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 LTBRP36941 435 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 VCPP55072 806 aaKnown RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 EIF3EP60228 445 aaKnown RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 XRCC4Q13426 336 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 DHX34Q14147 1143 aaKnown RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 ARTNQ5T4W7 220 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 RFWD3Q6PCD5 774 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 FAM217AQ8IXS0 508 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 KIAA1958Q8N8K9 716 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 SLC35B2Q8TB61 432 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 MSLNLQ96KJ4 702 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 FAM118BQ9BPY3 351 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 TMEM248Q9NWD8 314 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 DTLQ9NZJ0 730 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 MPP6Q9NZW5 540 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 TBC1D14Q9P2M4 693 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 DNPEPQ9ULA0 475 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 CDH7Q9ULB5 785 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 ZNF148Q9UQR1 794 aa21.04■□□□□ 0.96
TSSC4-203ENST00000380996 DRG1Q9Y295 367 aaKnown RBP21.04■□□□□ 0.96
TSSC4-203ENST00000380996 MX2P20592 715 aa21.03■□□□□ 0.96
TSSC4-203ENST00000380996 GBE1Q04446 702 aa21.03■□□□□ 0.96
TSSC4-203ENST00000380996 PDK1Q15118 436 aa21.03■□□□□ 0.96
TSSC4-203ENST00000380996 ZNF77Q15935 545 aa21.03■□□□□ 0.96
TSSC4-203ENST00000380996 NLRP14Q86W24 1093 aa21.03■□□□□ 0.96
TSSC4-203ENST00000380996 CPXM2Q8N436 756 aa21.03■□□□□ 0.96
TSSC4-203ENST00000380996 SMARCD2Q92925 531 aa21.03■□□□□ 0.96
TSSC4-203ENST00000380996 NECTIN4Q96NY8 510 aa21.03■□□□□ 0.96
TSSC4-203ENST00000380996 AMACRQ9UHK6 382 aa21.03■□□□□ 0.96
TSSC4-203ENST00000380996 DENND4CQ5VZ89 1909 aa21.03■□□□□ 0.96
TSSC4-203ENST00000380996 NOTCH4Q99466 2003 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 H7C0C1 242 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 MFSD11O43934 449 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 ITGAVP06756 1048 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 RBP3P10745 1247 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 ATP5OP48047 213 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 CDH4P55283 916 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 DR1Q01658 176 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 USP4Q13107 963 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 TTC27Q6P3X3 843 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 BBS7Q8IWZ6 715 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 TMA16Q96EY4 203 aaKnown RBP21.02■□□□□ 0.96
TSSC4-203ENST00000380996 CCDC114Q96M63 670 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 ASB16Q96NS5 453 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 BRD8Q9H0E9 1235 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 MFHAS1Q9Y4C4 1052 aa21.02■□□□□ 0.96
TSSC4-203ENST00000380996 ZFP37Q9Y6Q3 630 aaPredicted RBP21.02■□□□□ 0.96
TSSC4-203ENST00000380996 HACD1B0YJ81 288 aa21.01■□□□□ 0.95
TSSC4-203ENST00000380996 SLC9A3R1O14745 358 aaPredicted RBP21.01■□□□□ 0.95
TSSC4-203ENST00000380996 PPP1R12AO14974 1030 aaPredicted RBP21.01■□□□□ 0.95
TSSC4-203ENST00000380996 CLDN11O75508 207 aa21.01■□□□□ 0.95
TSSC4-203ENST00000380996 ZNF189O75820 626 aaPredicted RBP21.01■□□□□ 0.95
TSSC4-203ENST00000380996 ECEL1O95672 775 aa21.01■□□□□ 0.95
TSSC4-203ENST00000380996 GAS8O95995 478 aa21.01■□□□□ 0.95
TSSC4-203ENST00000380996 KCNJ1P48048 391 aa21.01■□□□□ 0.95
TSSC4-203ENST00000380996 MAPKAPK2P49137 400 aa21.01■□□□□ 0.95
TSSC4-203ENST00000380996 SLC10A2Q12908 348 aaPredicted RBP21.01■□□□□ 0.95
TSSC4-203ENST00000380996 OASLQ15646 514 aaKnown RBP21.01■□□□□ 0.95
TSSC4-203ENST00000380996 ALFQ53S48 1182 aa21.01■□□□□ 0.95
TSSC4-203ENST00000380996 FAM78AQ5JUQ0 283 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms