RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 TMEM30AQ9NV96 361 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 KLHL8Q9P2G9 620 aaPredicted RBP12.97□□□□□ -0.33
VPS16-202ENST00000380445 OR12D3Q9UGF7 316 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 INPP5FQ9Y2H2 1132 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 WDR91A4D1P6 747 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 ERI2A8K979 691 aaKnown RBP12.96□□□□□ -0.33
VPS16-202ENST00000380445 FAM72CH0Y354 149 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
VPS16-202ENST00000380445 EZRP15311 586 aaKnown RBP12.96□□□□□ -0.33
VPS16-202ENST00000380445 PGAM1P18669 254 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 TYMPP19971 482 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 PSMB4P28070 264 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 PPIDQ08752 370 aaKnown RBP12.96□□□□□ -0.33
VPS16-202ENST00000380445 FAM72AQ5TYM5 149 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 FAM72DQ6L9T8 149 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 C4orf50Q6ZRC1 276 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 RNF180Q86T96 592 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 FAM72BQ86X60 149 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 ZNF276Q8N554 614 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 HDAC11Q96DB2 347 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 SUSD3Q96L08 255 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 FAM111AQ96PZ2 611 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 SRPK1Q96SB4 655 aaKnown RBP12.96□□□□□ -0.33
VPS16-202ENST00000380445 TKTL2Q9H0I9 626 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 ECT2Q9H8V3 914 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 TRHDEQ9UKU6 1024 aa12.96□□□□□ -0.33
VPS16-202ENST00000380445 I3L4J1 428 aa12.96□□□□□ -0.34
VPS16-202ENST00000380445 CCND3P30281 292 aaPredicted RBP12.96□□□□□ -0.34
VPS16-202ENST00000380445 CCNFP41002 786 aa12.96□□□□□ -0.34
VPS16-202ENST00000380445 RABGGTBP53611 331 aa12.96□□□□□ -0.34
VPS16-202ENST00000380445 PAN2Q504Q3 1202 aaKnown RBP12.96□□□□□ -0.34
VPS16-202ENST00000380445 BHLHA9Q7RTU4 235 aa12.96□□□□□ -0.34
VPS16-202ENST00000380445 EDEM1Q92611 657 aa12.96□□□□□ -0.34
VPS16-202ENST00000380445 RNF34Q969K3 372 aa12.96□□□□□ -0.34
VPS16-202ENST00000380445 SMYD2Q9NRG4 433 aa12.96□□□□□ -0.34
VPS16-202ENST00000380445 ETAA1Q9NY74 926 aa12.96□□□□□ -0.34
VPS16-202ENST00000380445 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.96□□□□□ -0.34
VPS16-202ENST00000380445 NR2E3Q9Y5X4 410 aa12.96□□□□□ -0.34
VPS16-202ENST00000380445 WDR27A2RRH5 827 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 INPPL1O15357 1258 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 POLBP06746 335 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 CSH1P0DML2 217 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 CSH2P0DML3 217 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 MGAT5Q09328 741 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 NAA25Q14CX7 972 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 SNCBQ16143 134 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 ITPRIPL1Q6GPH6 555 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 ZNF449Q6P9G9 518 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 TRMT10BQ6PF06 316 aaKnown RBP12.95□□□□□ -0.34
VPS16-202ENST00000380445 TIFABQ6ZNK6 161 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 MARK2Q7KZI7 788 aaKnown RBP12.95□□□□□ -0.34
VPS16-202ENST00000380445 TSSK1BQ9BXA7 367 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 TRIM55Q9BYV6 548 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 TXLNGQ9NUQ3 528 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 TDRD15B5MCY1 1934 aaKnown RBP12.95□□□□□ -0.34
VPS16-202ENST00000380445 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.95□□□□□ -0.34
VPS16-202ENST00000380445 KLF11O14901 512 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 MGRN1O60291 552 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 RFPL1O75677 317 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 TGDSO95455 350 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 EOMESO95936 686 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 IL1BP01584 269 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 PTPN3P26045 913 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 EPHB2P29323 1055 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 GCKP35557 465 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 SERPINB4P48594 390 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 SESN2P58004 480 aaPredicted RBP12.95□□□□□ -0.34
VPS16-202ENST00000380445 NCALDP61601 193 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 COG7P83436 770 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 ZNF33AQ06730 810 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 SPDYAQ5MJ70 313 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 SPATA2LQ8IUW3 424 aaPredicted RBP12.95□□□□□ -0.34
VPS16-202ENST00000380445 KIRREL3Q8IZU9 778 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 C10orf82Q8WW14 230 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 KLHL29Q96CT2 875 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 OXNAD1Q96HP4 312 aaPredicted RBP12.95□□□□□ -0.34
VPS16-202ENST00000380445 PKMYT1Q99640 499 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 OSBPL2Q9H1P3 480 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 ABCC13Q9NSE7 274 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 PLLPQ9Y342 182 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 CASP8AP2Q9UKL3 1982 aa12.95□□□□□ -0.34
VPS16-202ENST00000380445 KCNK1O00180 336 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 AP3B1O00203 1094 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 C2CD2LO14523 706 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 SKAP2O75563 359 aaPredicted RBP12.94□□□□□ -0.34
VPS16-202ENST00000380445 MGAT1P26572 445 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 HTR7P34969 479 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 ELF3P78545 371 aaPredicted RBP12.94□□□□□ -0.34
VPS16-202ENST00000380445 YWHAHQ04917 246 aaPredicted RBP12.94□□□□□ -0.34
VPS16-202ENST00000380445 BRMS1LQ5PSV4 323 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 GLB1LQ6UWU2 654 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 CD300LGQ6UXG3 332 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 TBC1D1Q86TI0 1168 aaPredicted RBP12.94□□□□□ -0.34
VPS16-202ENST00000380445 ACMSDQ8TDX5 336 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 RHOBTB2Q9BYZ6 727 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 ANLNQ9NQW6 1124 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 AP2A1O95782 977 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 CRHR1P34998 444 aa12.94□□□□□ -0.34
VPS16-202ENST00000380445 GARSP41250 739 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms