RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CCL5P13501 91 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 SCTRP47872 440 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 NEK3P51956 506 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 CCDC15Q0P6D6 951 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 PAN2Q504Q3 1202 aaKnown RBP23.75■■□□□ 1.39
VPS16-201ENST00000380443 PID1Q7Z2X4 250 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 TAC4Q86UU9 113 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 EDEM1Q92611 657 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 FUBP3Q96I24 572 aaKnown RBP eCLIP23.75■■□□□ 1.39
VPS16-201ENST00000380443 RNF208Q9H0X6 261 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 PHTF1Q9UMS5 762 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 PATJQ8NI35 1801 aa23.74■■□□□ 1.39
VPS16-201ENST00000380443 PGAM1P18669 254 aa23.74■■□□□ 1.39
VPS16-201ENST00000380443 NFE2Q16621 373 aaPredicted RBP23.74■■□□□ 1.39
VPS16-201ENST00000380443 TIFABQ6ZNK6 161 aa23.74■■□□□ 1.39
VPS16-201ENST00000380443 RTN4RL1Q86UN2 441 aaPredicted RBP23.74■■□□□ 1.39
VPS16-201ENST00000380443 PDCD7Q8N8D1 485 aaKnown RBP23.74■■□□□ 1.39
VPS16-201ENST00000380443 ZNF75CPQ92670 426 aaPredicted RBP23.74■■□□□ 1.39
VPS16-201ENST00000380443 CDKL2Q92772 493 aa23.74■■□□□ 1.39
VPS16-201ENST00000380443 RHOBTB2Q9BYZ6 727 aa23.74■■□□□ 1.39
VPS16-201ENST00000380443 KLHL8Q9P2G9 620 aaPredicted RBP23.74■■□□□ 1.39
VPS16-201ENST00000380443 PTPRDP23468 1912 aa23.74■■□□□ 1.39
VPS16-201ENST00000380443 DNM1LO00429 736 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 PSMD3O43242 534 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 DHRS4L1P0CG22 281 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 PTPN3P26045 913 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 RABGGTBP53611 331 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 ZKSCAN8Q15776 578 aaPredicted RBP23.73■■□□□ 1.39
VPS16-201ENST00000380443 BTBD8Q5XKL5 378 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 LZTR1Q8N653 840 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 ZNF398Q8TD17 642 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 RNF34Q969K3 372 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 ZCWPW1Q9H0M4 648 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 ELAC1Q9H777 363 aaKnown RBP23.73■■□□□ 1.39
VPS16-201ENST00000380443 RXFP1Q9HBX9 757 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 ANLNQ9NQW6 1124 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 SEPT10Q9P0V9 454 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 SLC12A4Q9UP95 1085 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 FRMPD3Q5JV73 1810 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 TRIM49D1C9J1S8 452 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 I6L893 689 aaPredicted RBP23.73■■□□□ 1.39
VPS16-201ENST00000380443 TNFRSF10BO14763 440 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 SYN3O14994 580 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 IRAK2O43187 625 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 PSMB4P28070 264 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 CCNFP41002 786 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 FRG1Q14331 258 aaKnown RBP23.73■■□□□ 1.39
VPS16-201ENST00000380443 TTC31Q49AM3 519 aaPredicted RBP23.73■■□□□ 1.39
VPS16-201ENST00000380443 MARK2Q7KZI7 788 aaKnown RBP23.73■■□□□ 1.39
VPS16-201ENST00000380443 COLGALT2Q8IYK4 626 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 CCDC33Q8N5R6 958 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 HASPINQ8TF76 798 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 SERAC1Q96JX3 654 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 SMOC2Q9H3U7 446 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 GRID1Q9ULK0 1009 aa23.73■■□□□ 1.39
VPS16-201ENST00000380443 DNAJB2P25686 324 aa23.72■■□□□ 1.39
VPS16-201ENST00000380443 EPHB2P29323 1055 aa23.72■■□□□ 1.39
VPS16-201ENST00000380443 GRIK1P39086 918 aa23.72■■□□□ 1.39
VPS16-201ENST00000380443 GARSP41250 739 aaKnown RBP23.72■■□□□ 1.39
VPS16-201ENST00000380443 PPP2R5DQ14738 602 aa23.72■■□□□ 1.39
VPS16-201ENST00000380443 CGB2Q6NT52 195 aa23.72■■□□□ 1.39
VPS16-201ENST00000380443 TRIM42Q8IWZ5 723 aa23.72■■□□□ 1.39
VPS16-201ENST00000380443 IQCGQ9H095 443 aaKnown RBP23.72■■□□□ 1.39
VPS16-201ENST00000380443 UNC93B1Q9H1C4 597 aa23.72■■□□□ 1.39
VPS16-201ENST00000380443 TMEM161AQ9NX61 479 aa23.72■■□□□ 1.39
VPS16-201ENST00000380443 CXorf49A8MYA2 514 aaPredicted RBP23.71■■□□□ 1.39
VPS16-201ENST00000380443 COPEO14579 308 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 FGF10O15520 208 aaPredicted RBP23.71■■□□□ 1.39
VPS16-201ENST00000380443 LRIG2O94898 1065 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 AP2A1O95782 977 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 IBSPP21815 317 aaPredicted RBP23.71■■□□□ 1.39
VPS16-201ENST00000380443 ALDH3A1P30838 453 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 SLC5A3P53794 718 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 GALNTL6Q49A17 601 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 CLLU1OSQ5K130 101 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 ARHGAP18Q8N392 663 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 MPP5Q8N3R9 675 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 FAM193BQ96PV7 902 aaPredicted RBP23.71■■□□□ 1.39
VPS16-201ENST00000380443 TMEM209Q96SK2 561 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.71■■□□□ 1.39
VPS16-201ENST00000380443 TRPV6Q9H1D0 765 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 STARD7Q9NQZ5 370 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 USH1CQ9Y6N9 552 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 NLRC5Q86WI3 1866 aa23.71■■□□□ 1.39
VPS16-201ENST00000380443 IL1BP01584 269 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 ITGB1P05556 798 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 PYGBP11216 843 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 ADRA1DP25100 572 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 HOXC13P31276 330 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 CCR1P32246 355 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 ETV4P43268 484 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 NRG1Q02297 640 aaPredicted RBP23.7■■□□□ 1.39
VPS16-201ENST00000380443 TEX44Q53QW1 395 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 SPANXN3Q5MJ09 141 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 FYB2Q5VWT5 728 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 ACMSDQ8TDX5 336 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 DEPDC1BQ8WUY9 529 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 OXNAD1Q96HP4 312 aaPredicted RBP23.7■■□□□ 1.39
VPS16-201ENST00000380443 C8orf48Q96LL4 319 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 TSGA13Q96PP4 275 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms