RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 SMARCE1Q969G3 411 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 FAM149B1Q96BN6 582 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 SLC6A18Q96N87 628 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 OMDQ99983 421 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 RSPH9Q9H1X1 276 aaPredicted RBP23.97■■□□□ 1.43
U2AF1-202ENST00000380276 AASDHPPTQ9NRN7 309 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 SCML1Q9UN30 329 aa23.97■■□□□ 1.43
U2AF1-202ENST00000380276 GOLGA6L4A6NEF3 574 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 MID1O15344 667 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 RNASEH2AO75792 299 aaKnown RBP23.96■■□□□ 1.43
U2AF1-202ENST00000380276 GABBR2O75899 941 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 CTSKP43235 329 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 RPS24P62847 133 aaKnown RBP23.96■■□□□ 1.43
U2AF1-202ENST00000380276 LRRC63Q05C16 580 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 CYP4F3Q08477 520 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 CNGA2Q16280 664 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 CFAP52Q8N1V2 620 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 FIBINQ8TAL6 211 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 KAT5Q92993 513 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 SKA1Q96BD8 255 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 SERPINB11Q96P15 392 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 GSDMAQ96QA5 445 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 IRX2Q9BZI1 471 aaPredicted RBP23.96■■□□□ 1.43
U2AF1-202ENST00000380276 METTL14Q9HCE5 456 aaKnown RBP23.96■■□□□ 1.43
U2AF1-202ENST00000380276 ST7Q9NRC1 585 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 DMXL2Q8TDJ6 3036 aa23.96■■□□□ 1.43
U2AF1-202ENST00000380276 TRABD2BA6NFA1 517 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 RNF225M0QZC1 329 aaPredicted RBP23.95■■□□□ 1.42
U2AF1-202ENST00000380276 FBXO21O94952 628 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 MOCS3O95396 460 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 IGHV4-34P06331 123 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 STIM1Q13586 685 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 STILQ15468 1287 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 CST6Q15828 149 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 PRAMEF14Q5SWL7 426 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 RNF219Q5W0B1 726 aaPredicted RBP23.95■■□□□ 1.42
U2AF1-202ENST00000380276 ISM2Q6H9L7 571 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 NCEH1Q6PIU2 408 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 DHRS13Q6UX07 377 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 MMS22LQ6ZRQ5 1243 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 USP30Q70CQ3 517 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 MMAAQ8IVH4 418 aaKnown RBP23.95■■□□□ 1.42
U2AF1-202ENST00000380276 ADAM32Q8TC27 787 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 DQX1Q8TE96 717 aaKnown RBP23.95■■□□□ 1.42
U2AF1-202ENST00000380276 TTC17Q96AE7 1141 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 MYEOVQ96EZ4 313 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 LRIG1Q96JA1 1093 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 NUCKS1Q9H1E3 243 aaKnown RBP23.95■■□□□ 1.42
U2AF1-202ENST00000380276 SERGEFQ9UGK8 458 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 ZFYVE26Q68DK2 2539 aa23.95■■□□□ 1.42
U2AF1-202ENST00000380276 PLXNA2O75051 1894 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 LRRC72A6NJI9 287 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 PCDHGA12O60330 932 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 PSMD8P48556 350 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 NUMBP49757 651 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 GALCP54803 685 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 RACK1P63244 317 aaKnown RBP23.94■■□□□ 1.42
U2AF1-202ENST00000380276 NUCB2P80303 420 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 CETN1Q12798 172 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 HNRNPA1L2Q32P51 320 aaKnown RBP23.94■■□□□ 1.42
U2AF1-202ENST00000380276 COBLL1Q53SF7 1204 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 RRAGAQ7L523 313 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 GATAD2AQ86YP4 633 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 AZIN2Q96A70 460 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 MYO19Q96H55 970 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 FCRL2Q96LA5 508 aaPredicted RBP23.94■■□□□ 1.42
U2AF1-202ENST00000380276 HSFY1Q96LI6 401 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 ZSWIM1Q9BR11 485 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 NEUROG2Q9H2A3 272 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 INTS6Q9UL03 887 aaKnown RBP23.94■■□□□ 1.42
U2AF1-202ENST00000380276 ERVW-1Q9UQF0 538 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 NAALADL1Q9UQQ1 740 aa23.94■■□□□ 1.42
U2AF1-202ENST00000380276 A0A1W2PPC4 97 aa23.93■■□□□ 1.42
U2AF1-202ENST00000380276 TTC34A8MYJ7 566 aa23.93■■□□□ 1.42
U2AF1-202ENST00000380276 CAPN9O14815 690 aa23.93■■□□□ 1.42
U2AF1-202ENST00000380276 PSMA7O14818 248 aa23.93■■□□□ 1.42
U2AF1-202ENST00000380276 VILLO15195 856 aa23.93■■□□□ 1.42
U2AF1-202ENST00000380276 ABCB4P21439 1286 aa23.93■■□□□ 1.42
U2AF1-202ENST00000380276 CTSOP43234 321 aaPredicted RBP23.93■■□□□ 1.42
U2AF1-202ENST00000380276 FSCBQ5H9T9 825 aa23.93■■□□□ 1.42
U2AF1-202ENST00000380276 PITRM1Q5JRX3 1037 aa23.93■■□□□ 1.42
U2AF1-202ENST00000380276 LGI2Q8N0V4 545 aa23.93■■□□□ 1.42
U2AF1-202ENST00000380276 FMR1NBQ8N0W7 255 aaPredicted RBP23.93■■□□□ 1.42
U2AF1-202ENST00000380276 LMLNQ96KR4 655 aa23.93■■□□□ 1.42
U2AF1-202ENST00000380276 MRGPRX3Q96LB0 322 aa23.93■■□□□ 1.42
U2AF1-202ENST00000380276 TLR6Q9Y2C9 796 aa23.93■■□□□ 1.42
U2AF1-202ENST00000380276 TP53BP1Q12888 1972 aaPredicted RBP23.92■■□□□ 1.42
U2AF1-202ENST00000380276 A0A1B0GTQ1 180 aa23.92■■□□□ 1.42
U2AF1-202ENST00000380276 DFNA5O60443 496 aa23.92■■□□□ 1.42
U2AF1-202ENST00000380276 DKK1O94907 266 aa23.92■■□□□ 1.42
U2AF1-202ENST00000380276 LUC7L3O95232 432 aaKnown RBP23.92■■□□□ 1.42
U2AF1-202ENST00000380276 APOEP02649 317 aa23.92■■□□□ 1.42
U2AF1-202ENST00000380276 ITGAVP06756 1048 aa23.92■■□□□ 1.42
U2AF1-202ENST00000380276 SLC8A1P32418 973 aa23.92■■□□□ 1.42
U2AF1-202ENST00000380276 DCAF6Q58WW2 860 aa23.92■■□□□ 1.42
U2AF1-202ENST00000380276 MS4A13Q5J8X5 152 aa23.92■■□□□ 1.42
U2AF1-202ENST00000380276 RAP1GAP2Q684P5 730 aa23.92■■□□□ 1.42
U2AF1-202ENST00000380276 KLHL10Q6JEL2 608 aa23.92■■□□□ 1.42
U2AF1-202ENST00000380276 CHSY1Q86X52 802 aa23.92■■□□□ 1.42
U2AF1-202ENST00000380276 SCUBE3Q8IX30 993 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms