RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 APPL1Q9UKG1 709 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 USP3Q9Y6I4 520 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 TANC1Q9C0D5 1861 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 IGKV6-21A0A0C4DH24 114 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 CLPTM1O96005 669 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 AMHP03971 560 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 SERPINB5P36952 375 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 HMGCS2P54868 508 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 SESN2P58004 480 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 MRPS22P82650 360 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 USP41Q3LFD5 358 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 PKDCCQ504Y2 493 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 C6orf52Q5T4I8 152 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 LCA5Q86VQ0 697 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 ACVR1CQ8NER5 493 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 ADAM32Q8TC27 787 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 AGR3Q8TD06 166 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 CLEC4CQ8WTT0 213 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 TRAPPC12Q8WVT3 735 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 KCTD15Q96SI1 283 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 LGMNQ99538 433 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 CEP41Q9BYV8 373 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 MYOZ2Q9NPC6 264 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 SNX15Q9NRS6 342 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 SYBUQ9NX95 663 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 SSX2IPQ9Y2D8 614 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 AP4B1Q9Y6B7 739 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 EVPLQ92817 2033 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 PAPSS1O43252 624 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 DGKIO75912 1065 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 LTFP02788 710 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 CPA3P15088 417 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 ACAT1P24752 427 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 SLC5A2P31639 672 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 MLH1P40692 756 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 GTF2A2P52657 109 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 HPCAP84074 193 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 INCA1Q0VD86 236 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 CEACAM7Q14002 265 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 ADGRE1Q14246 886 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 DLG2Q15700 870 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 STXBP2Q15833 593 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 DPYSL2Q16555 572 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 PIGGQ5H8A4 983 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 IER5Q5VY09 327 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 CASC4Q6P4E1 433 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 B3GNT6Q6ZMB0 384 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 PYROXD2Q8N2H3 581 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 PPP4R1Q8TF05 950 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 KLHL32Q96NJ5 620 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 LPIN3Q9BQK8 851 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 SLC2A11Q9BYW1 496 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 ZNF385DQ9H6B1 395 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 WDR55Q9H6Y2 383 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 ZNF696Q9H7X3 374 aa9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 DDX18Q9NVP1 670 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-202ENST00000379600 SCN4AP35499 1836 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 SCN1AP35498 2009 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 GOLGA8QA0A0J9YX86 632 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 GOLGA8OA6NCC3 632 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 GOLGA8NF8WBI6 632 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 STX16-NPEPL1H3BU86 382 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 ACKR2O00590 384 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 CDK4P11802 303 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 ATP6V1B1P15313 513 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 PIK3R1P27986 724 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 EMP3P54852 163 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 MBTD1Q05BQ5 628 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 INSCQ1MX18 579 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 GOLGA7BQ2TAP0 167 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 PPP1R26Q5T8A7 1209 aaPredicted RBP9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 LRRC8BQ6P9F7 803 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 CCDC185Q8N715 623 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 PIP4K2CQ8TBX8 421 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 ISL2Q96A47 359 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 CNBD2Q96M20 576 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 CSPG4P5Q96PW8 444 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 PKP2Q99959 881 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 TEX13BQ9BXU2 312 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 VRTNQ9H8Y1 702 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 NRBP2Q9NSY0 501 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 GTF2IRD1Q9UHL9 959 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 AIM2O14862 343 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 JUNP05412 331 aaKnown RBP9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 CHRNGP07510 517 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 ABCG1P45844 678 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 NUDT2P50583 147 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 SCNN1BP51168 640 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 SMYD5Q6GMV2 418 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 C4orf22Q6V702 233 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 CLEC14AQ86T13 490 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 SNX32Q86XE0 403 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 DSELQ8IZU8 1212 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 DCLK2Q8N568 766 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 AGBL3Q8NEM8 1001 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 KCNK16Q96T55 309 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 TBCBQ99426 244 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 GCOM2Q9BZD3 368 aaPredicted RBP9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 CXCL16Q9H2A7 254 aa9.59□□□□□ -0.87
NHLRC3-202ENST00000379600 COPS7BQ9H9Q2 264 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms