RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 DMAP1Q9NPF5 467 aaPredicted RBP15.27■□□□□ 0.04
PRNP-201ENST00000379440 BLOC1S6Q9UL45 172 aa15.27■□□□□ 0.04
PRNP-201ENST00000379440 SKAP2O75563 359 aaPredicted RBP15.27■□□□□ 0.03
PRNP-201ENST00000379440 DDHD2O94830 711 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 UBOX5O94941 541 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 PYGLP06737 847 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 CKBP12277 381 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 BMPR2Q13873 1038 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 ARL13BQ3SXY8 428 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 TTC39BQ5VTQ0 682 aaPredicted RBP15.27■□□□□ 0.03
PRNP-201ENST00000379440 CASC4Q6P4E1 433 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 RGS9BPQ6ZS82 235 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 PID1Q7Z2X4 250 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 RNF180Q86T96 592 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 ZNF276Q8N554 614 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 GSDMBQ8TAX9 411 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 OR12D3Q9UGF7 316 aa15.27■□□□□ 0.03
PRNP-201ENST00000379440 SF3B1O75533 1304 aaKnown RBP eCLIP15.26■□□□□ 0.034e-7■■■■■ 133.7
PRNP-201ENST00000379440 OPHN1O60890 802 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 STK10O94804 968 aaKnown RBP15.26■□□□□ 0.03
PRNP-201ENST00000379440 CXCR3P49682 368 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 PGFP49763 221 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 AIF1P55008 147 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 MBTPS1Q14703 1052 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 DCLRE1AQ6PJP8 1040 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 ALKBH8Q96BT7 664 aaKnown RBP15.26■□□□□ 0.03
PRNP-201ENST00000379440 LMCD1Q9NZU5 365 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 PCDHA11Q9Y5I1 949 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 EDF1O60869 148 aaKnown RBP15.26■□□□□ 0.03
PRNP-201ENST00000379440 MGAT1P26572 445 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 SLC18A2Q05940 514 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 SMAD1Q15797 465 aaKnown RBP15.26■□□□□ 0.03
PRNP-201ENST00000379440 CDHR3Q6ZTQ4 885 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 MYLK4Q86YV6 388 aaPredicted RBP15.26■□□□□ 0.03
PRNP-201ENST00000379440 THEM5Q8N1Q8 247 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 FITM2Q8N6M3 262 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 SPDYE1Q8NFV5 336 aaPredicted RBP15.26■□□□□ 0.03
PRNP-201ENST00000379440 RNF34Q969K3 372 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 SPDL1Q96EA4 605 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 STAMBPL1Q96FJ0 436 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 OXNAD1Q96HP4 312 aaPredicted RBP15.26■□□□□ 0.03
PRNP-201ENST00000379440 SUSD3Q96L08 255 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 AGAP3Q96P47 875 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 PGLYRP2Q96PD5 576 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 FAM111AQ96PZ2 611 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 SLC17A6Q9P2U8 582 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 DSEQ9UL01 958 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 SLC12A4Q9UP95 1085 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 STARD13Q9Y3M8 1113 aa15.26■□□□□ 0.03
PRNP-201ENST00000379440 TM9SF1O15321 606 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 LRIG2O94898 1065 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 F9P00740 461 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 EPHB2P29323 1055 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 PARP6Q2NL67 630 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 LRRC8BQ6P9F7 803 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 STKLD1Q8NE28 680 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 DQX1Q8TE96 717 aaKnown RBP15.25■□□□□ 0.03
PRNP-201ENST00000379440 GRAMD1AQ96CP6 724 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 HAUS2Q9NVX0 235 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 KLHL14Q9P2G3 628 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 KLHL8Q9P2G9 620 aaPredicted RBP15.25■□□□□ 0.03
PRNP-201ENST00000379440 FAM159BA6NKW6 160 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 TPD52L2O43399 206 aaKnown RBP15.25■□□□□ 0.03
PRNP-201ENST00000379440 SNRPAP09012 282 aaKnown RBP15.25■□□□□ 0.03
PRNP-201ENST00000379440 PTPN3P26045 913 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 NEK3P51956 506 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 CLLU1OSQ5K130 101 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 TRAF7Q6Q0C0 670 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 OTOAQ7RTW8 1153 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 CD99L2Q8TCZ2 262 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 LINC01599Q8WXQ3 324 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 IRGQQ8WZA9 623 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 PTPRN2Q92932 1015 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 APOPT1Q96IL0 206 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 RGS18Q9NS28 235 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 KLC4Q9NSK0 619 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 RRN3Q9NYV6 651 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 ZNF180Q9UJW8 692 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 NUDT5Q9UKK9 219 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 MRPL42Q9Y6G3 142 aaKnown RBP15.25■□□□□ 0.03
PRNP-201ENST00000379440 THSD7BQ9C0I4 1608 aa15.25■□□□□ 0.03
PRNP-201ENST00000379440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.24■□□□□ 0.03
PRNP-201ENST00000379440 HMX2A2RU54 273 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 SDR42E2A6NKP2 422 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 USP12O75317 370 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 KRT37O76014 449 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 SRGAP2BP0DMP2 458 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 SKIP12755 728 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 EZRP15311 586 aaKnown RBP15.24■□□□□ 0.03
PRNP-201ENST00000379440 GRIK1P39086 918 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 HCAR3P49019 387 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 TSPY1Q01534 308 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 YWHAHQ04917 246 aaPredicted RBP15.24■□□□□ 0.03
PRNP-201ENST00000379440 RBM12BQ8IXT5 1001 aaKnown RBP15.24■□□□□ 0.03
PRNP-201ENST00000379440 SMC1BQ8NDV3 1235 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 ARNTL2Q8WYA1 636 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 CELF6Q96J87 481 aaKnown RBP15.24■□□□□ 0.03
PRNP-201ENST00000379440 GLT1D1Q96MS3 346 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 UROC1Q96N76 676 aa15.24■□□□□ 0.03
PRNP-201ENST00000379440 FERMT1Q9BQL6 677 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms