RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 VAT1Q99536 393 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 PAIP2Q9BPZ3 127 aaKnown RBP10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 LBHD1Q9BQE6 289 aaPredicted RBP10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 PAAF1Q9BRP4 392 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 COLEC11Q9BWP8 271 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 SEZ6LQ9BYH1 1024 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 MAGEB5Q9BZ81 275 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 OSBPL2Q9H1P3 480 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 VPS11Q9H270 941 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 WDCPQ9H6R7 721 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 KIF9Q9HAQ2 790 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 MKS1Q9NXB0 559 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 COX16Q9P0S2 106 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 KLHL14Q9P2G3 628 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 KANSL3Q9P2N6 904 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 PRKAG3Q9UGI9 489 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 CAPN7Q9Y6W3 813 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 CDH23Q9H251 3354 aa10.77□□□□□ -0.68
POLR2J3-201ENST00000379340 SDR42E2A6NKP2 422 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 FAM159BA6NKW6 160 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 AVILO75366 819 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 MYCNP04198 464 aaPredicted RBP10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 BDNFP23560 247 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 CACNA2D1P54289 1103 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 PPIDQ08752 370 aaKnown RBP10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 CCDC15Q0P6D6 951 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 IFRD2Q12894 506 aaPredicted RBP10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 DNAJC3Q13217 504 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 SLC1A5Q15758 541 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 TTC31Q49AM3 519 aaPredicted RBP10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 BRMS1LQ5PSV4 323 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 ITPRIPL1Q6GPH6 555 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 GLB1LQ6UWU2 654 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 SLC24A5Q71RS6 500 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 CHSY1Q86X52 802 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 SPATA2LQ8IUW3 424 aaPredicted RBP10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 DCP1BQ8IZD4 617 aaKnown RBP10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 CCNYQ8ND76 341 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 HDAC11Q96DB2 347 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 STAMBPL1Q96FJ0 436 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 LGMNQ99538 433 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 FTHL17Q9BXU8 183 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 PRDM12Q9H4Q4 367 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 ABCC13Q9NSE7 274 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 TRMT13Q9NUP7 481 aaKnown RBP10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 TMEM30AQ9NV96 361 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 TRHDEQ9UKU6 1024 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 INPP5FQ9Y2H2 1132 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 MFHAS1Q9Y4C4 1052 aa10.77□□□□□ -0.69
POLR2J3-201ENST00000379340 ZNF638Q14966 1978 aaKnown RBP10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 AP3B1O00203 1094 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 LPXNO60711 386 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 EDF1O60869 148 aaKnown RBP10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 ALDH1A2O94788 518 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 IGLV3-25P01717 112 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 CKBP12277 381 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 FOSL2P15408 326 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 PGAM1P18669 254 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 CCNFP41002 786 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 SCTRP47872 440 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 NEK3P51956 506 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 FAM189BP81408 668 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 YWHAHQ04917 246 aaPredicted RBP10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 DSC1Q08554 894 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 FAAP100Q0VG06 881 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 GALNT2Q10471 571 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 WASHC5Q12768 1159 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 ZKSCAN8Q15776 578 aaPredicted RBP10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 FYB2Q5VWT5 728 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 BSPRYQ5W0U4 402 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 MARK2Q7KZI7 788 aaKnown RBP10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 TRIM42Q8IWZ5 723 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 CTAGE3PQ8IX95 158 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 ZNF567Q8N184 647 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 PPM1NQ8N819 430 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 ZNF398Q8TD17 642 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 TCP10LQ8TDR4 215 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 CDKL2Q92772 493 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 TTC17Q96AE7 1141 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 IQCGQ9H095 443 aaKnown RBP10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 TKTL2Q9H0I9 626 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 PHTF1Q9UMS5 762 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 SLC12A4Q9UP95 1085 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 MAD1L1Q9Y6D9 718 aa10.76□□□□□ -0.69
POLR2J3-201ENST00000379340 DNAH12Q6ZR08 3092 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 TRIM49D1C9J1S8 452 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 I3L4J1 428 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 COPEO14579 308 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 PSMD3O43242 534 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 IL1BP01584 269 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 DHRS4L1P0CG22 281 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 DNAJB2P25686 324 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 FRG1Q14331 258 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 SYCP2LQ5T4T6 812 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 BTBD8Q5XKL5 378 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 TIFABQ6ZNK6 161 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 SH2D5Q6ZV89 423 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 PRPF39Q86UA1 669 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 TAC4Q86UU9 113 aa10.75□□□□□ -0.69
POLR2J3-201ENST00000379340 SLC43A3Q8NBI5 491 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms