RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 TRIM13O60858 407 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 CYP1A1P04798 512 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-203ENST00000378169 CALB2P22676 271 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 MAP4P27816 1152 aaKnown RBP13.49□□□□□ -0.25
NPHP4-203ENST00000378169 ELAVL2Q12926 359 aaKnown RBP13.49□□□□□ -0.25
NPHP4-203ENST00000378169 DDX39BQ13838 428 aaKnown RBP13.49□□□□□ -0.25
NPHP4-203ENST00000378169 TBCCQ15814 346 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 QPCTQ16769 361 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 DDR2Q16832 855 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 FAM35AQ86V20 835 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 LRRC39Q96DD0 335 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 C12orf65Q9H3J6 166 aaKnown RBP13.49□□□□□ -0.25
NPHP4-203ENST00000378169 ACSS3Q9H6R3 686 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 HMGXB4Q9UGU5 601 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 SFMBT1Q9UHJ3 866 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 HACD1B0YJ81 288 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 HOXA2O43364 376 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 TRIM16O95361 564 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 ATP4AP20648 1035 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 CCL23P55773 120 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 TEDDM1Q5T9Z0 273 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 C16orf89Q6UX73 402 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 TDRD5Q8NAT2 981 aaKnown RBP13.49□□□□□ -0.25
NPHP4-203ENST00000378169 TEPSINQ96N21 525 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 RNF208Q9H0X6 261 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 DPEP3Q9H4B8 488 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-203ENST00000378169 ITGB6P18564 788 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 PTPN4P29074 926 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 RABGGTBP53611 331 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 MAXP61244 160 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 SH3PXD2AQ5TCZ1 1133 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 RAP1GAP2Q684P5 730 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 PSTKQ8IV42 348 aaKnown RBP13.49□□□□□ -0.25
NPHP4-203ENST00000378169 SCUBE1Q8IWY4 988 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 P2RY11Q96G91 374 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 LPIN3Q9BQK8 851 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 DUSP16Q9BY84 665 aa13.49□□□□□ -0.25
NPHP4-203ENST00000378169 SMIM35A0A1B0GVV1 85 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 MAGEB16A2A368 324 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 TPP1O14773 563 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 DCXO43602 365 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 SOAT2O75908 522 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 SERPINE1P05121 402 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 OR4Q2P0C623 313 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 PIRTP0C851 137 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 UBTFL6P0CB48 400 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-203ENST00000378169 DRD4P21917 467 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 NAGLUP54802 743 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 BTKQ06187 659 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 MTFR1Q15390 333 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 PACS2Q86VP3 889 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 FZD8Q9H461 694 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 SCUBE2Q9NQ36 999 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 ABCC13Q9NSE7 274 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 IRAK4Q9NWZ3 460 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 CDH9Q9ULB4 789 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 FAM237BA0A1B0GVD1 139 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 VPS26AO75436 327 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 C22orf31O95567 290 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 CREB1P16220 341 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 NRLP54845 237 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 SYTL3Q4VX76 610 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 CNPY4Q8N129 248 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 LZTR1Q8N653 840 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 RUBCNLQ9H714 662 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 TCF7L2Q9NQB0 619 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 THAP1Q9NVV9 213 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 PKD2L2Q9NZM6 624 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 IL1RAPL1Q9NZN1 696 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 THEGQ9P2T0 379 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 RPTORQ8N122 1335 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 TRDMT1O14717 391 aaKnown RBP13.48□□□□□ -0.25
NPHP4-203ENST00000378169 PAPSS1O43252 624 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-203ENST00000378169 MMP13P45452 471 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 PEX5P50542 639 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 INHBEP58166 350 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 TRABD2AQ86V40 505 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 PLD5Q8N7P1 536 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 PRCCQ92733 491 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-203ENST00000378169 NMRK2Q9NPI5 230 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 TBC1D13Q9NVG8 400 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 MPP6Q9NZW5 540 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 CACNG4Q9UBN1 327 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 MYH13Q9UKX3 1938 aa13.48□□□□□ -0.25
NPHP4-203ENST00000378169 TRPC5OSA6NMA1 111 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 MEI4A8MW99 385 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 A8MX80 341 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 HOXC6P09630 235 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 TCF4P15884 667 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 LMO2P25791 158 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 ARHGDIAP52565 204 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 ATXN1P54253 815 aaKnown RBP13.47□□□□□ -0.25
NPHP4-203ENST00000378169 BTG3Q14201 252 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-203ENST00000378169 GALNTL6Q49A17 601 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 TXNRD3NBQ6F5E7 133 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 FUKQ8N0W3 1084 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 CERS2Q96G23 380 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 OXNAD1Q96HP4 312 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-203ENST00000378169 CSPG4P5Q96PW8 444 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms