RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TOP3BO95985 862 aaKnown RBP12.04□□□□□ -0.48
NPHP4-202ENST00000378161 YWHAEP62258 255 aaKnown RBP12.04□□□□□ -0.48
NPHP4-202ENST00000378161 MYBPC1Q00872 1141 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 RHAGQ02094 409 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 TAP1Q03518 808 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 TRIM71Q2Q1W2 868 aaKnown RBP12.04□□□□□ -0.48
NPHP4-202ENST00000378161 NECAB2Q7Z6G3 386 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 SAV1Q9H4B6 383 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-202ENST00000378161 ZHX2Q9Y6X8 837 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 A0A087X0B3 334 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 SAGE2PA6NJ88 616 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 ENPP1P22413 925 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 GALCP54803 685 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 GRM2Q14416 872 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 PKN2Q16513 984 aaKnown RBP12.03□□□□□ -0.48
NPHP4-202ENST00000378161 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.03□□□□□ -0.48
NPHP4-202ENST00000378161 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 OR8H2Q8N162 312 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 UBASH3BQ8TF42 649 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 SGCDQ92629 289 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 SENP7Q9BQF6 1050 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 PDGFDQ9GZP0 370 aaPredicted RBP12.03□□□□□ -0.48
NPHP4-202ENST00000378161 HEMK1Q9Y5R4 338 aaPredicted RBP12.03□□□□□ -0.48
NPHP4-202ENST00000378161 POLR2BP30876 1174 aaKnown RBP12.03□□□□□ -0.48
NPHP4-202ENST00000378161 ZNF135P52742 658 aaPredicted RBP12.03□□□□□ -0.48
NPHP4-202ENST00000378161 MGAT5Q09328 741 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 GALNT1Q10472 559 aaPredicted RBP12.03□□□□□ -0.48
NPHP4-202ENST00000378161 SEMA3AQ14563 771 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 NFIL3Q16649 462 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 TMEM26Q6ZUK4 368 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 ZNF285Q96NJ3 590 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 SLC6A15Q9H2J7 730 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 STN1Q9H668 368 aaKnown RBP12.03□□□□□ -0.48
NPHP4-202ENST00000378161 ENTPD7Q9NQZ7 604 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 NINJ2Q9NZG7 142 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 MAT2BQ9NZL9 334 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 PLCL2Q9UPR0 1127 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 DGKBQ9Y6T7 804 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 DLG5Q8TDM6 1919 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 MYO5BQ9ULV0 1848 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 A0A0G2JPF8 293 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 HNRNPCL3B7ZW38 293 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 CPNE3O75131 537 aaKnown RBP12.03□□□□□ -0.48
NPHP4-202ENST00000378161 SNAP29O95721 258 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 ALBP02768 609 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 HNRNPCL4P0DMR1 293 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 KLRC3Q07444 240 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 DLGAP5Q15398 846 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 ARMCX4Q5H9R4 360 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 ARSKQ6UWY0 536 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 ADGRF4Q8IZF3 695 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 OR8H1Q8NGG4 311 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 RAB2BQ8WUD1 216 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 WNT8AQ9H1J5 351 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 ADAM7Q9H2U9 754 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 ABI2Q9NYB9 513 aaPredicted RBP12.03□□□□□ -0.48
NPHP4-202ENST00000378161 IL20Q9NYY1 176 aa12.03□□□□□ -0.48
NPHP4-202ENST00000378161 TRMT6Q9UJA5 497 aaKnown RBP12.03□□□□□ -0.48
NPHP4-202ENST00000378161 PNMA8CA0A1B0GUJ8 204 aa12.02□□□□□ -0.48
NPHP4-202ENST00000378161 ZNF254O75437 659 aa12.02□□□□□ -0.48
NPHP4-202ENST00000378161 NTSR2O95665 410 aa12.02□□□□□ -0.48
NPHP4-202ENST00000378161 ALAS1P13196 640 aa12.02□□□□□ -0.48
NPHP4-202ENST00000378161 HNRNPH3P31942 346 aaKnown RBP12.02□□□□□ -0.48
NPHP4-202ENST00000378161 ILF2Q12905 390 aaKnown RBP12.02□□□□□ -0.48
NPHP4-202ENST00000378161 TAF5Q15542 800 aa12.02□□□□□ -0.48
NPHP4-202ENST00000378161 EARS2Q5JPH6 523 aaKnown RBP12.02□□□□□ -0.48
NPHP4-202ENST00000378161 RC3H1Q5TC82 1133 aaKnown RBP12.02□□□□□ -0.48
NPHP4-202ENST00000378161 KYAT3Q6YP21 454 aaKnown RBP12.02□□□□□ -0.48
NPHP4-202ENST00000378161 CCDC149Q6ZUS6 474 aa12.02□□□□□ -0.48
NPHP4-202ENST00000378161 C12orf56Q8IXR9 622 aa12.02□□□□□ -0.48
NPHP4-202ENST00000378161 SLC35G2Q8TBE7 412 aa12.02□□□□□ -0.48
NPHP4-202ENST00000378161 TCP10LQ8TDR4 215 aa12.02□□□□□ -0.48
NPHP4-202ENST00000378161 CCDC120Q96HB5 630 aa12.02□□□□□ -0.48
NPHP4-202ENST00000378161 CPQQ9Y646 472 aa12.02□□□□□ -0.48
NPHP4-202ENST00000378161 KNDC1Q76NI1 1749 aa12.02□□□□□ -0.48
NPHP4-202ENST00000378161 FAM237BA0A1B0GVD1 139 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 PLD2O14939 933 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 MTA2O94776 668 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 T-ENOLP0DO92 83 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 PSKH1P11801 424 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 ZNF182P17025 639 aaPredicted RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 GRIA2P42262 883 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 UBXN2AP68543 259 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 UBE3AQ05086 875 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 TRIM32Q13049 653 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 POLD3Q15054 466 aaPredicted RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 CHI3L2Q15782 390 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 LRRC8EQ6NSJ5 796 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 PDIK1LQ8N165 341 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 CADM2Q8N3J6 435 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 HERVK_113Q902F9 699 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 TMA16Q96EY4 203 aaKnown RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 MSANTD3Q96H12 275 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 PAWRQ96IZ0 340 aaKnown RBP12.02□□□□□ -0.49
NPHP4-202ENST00000378161 COA1Q9GZY4 146 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 SLA2Q9H6Q3 261 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 EBF1Q9UH73 591 aa12.02□□□□□ -0.49
NPHP4-202ENST00000378161 SLC16A3O15427 465 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms