RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 NPY2RP49146 381 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 CRADDP78560 199 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 CNSTQ6PJW8 725 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 MTDHQ86UE4 582 aaKnown RBP16.65■□□□□ 0.26
RGP1-201ENST00000378078 LRRC34Q8IZ02 419 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 CHPFQ8IZ52 775 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 LPPQ93052 612 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 VPS33BQ9H267 617 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 NPTX2P47972 431 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 PKN2Q16513 984 aaKnown RBP16.65■□□□□ 0.26
RGP1-201ENST00000378078 ZCCHC23Q6ZST2 131 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 TPCN2Q8NHX9 752 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 IGDCC4Q8TDY8 1250 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 GTF3C2Q8WUA4 911 aaPredicted RBP16.65■□□□□ 0.26
RGP1-201ENST00000378078 TM6SF2Q9BZW4 377 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 CNGB3Q9NQW8 809 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 MARC1Q5VT66 337 aa16.64■□□□□ 0.26
RGP1-201ENST00000378078 SYT12Q8IV01 421 aa16.64■□□□□ 0.26
RGP1-201ENST00000378078 KIRREL3Q8IZU9 778 aa16.64■□□□□ 0.26
RGP1-201ENST00000378078 TATDN2Q93075 761 aa16.64■□□□□ 0.26
RGP1-201ENST00000378078 DSEQ9UL01 958 aa16.64■□□□□ 0.26
RGP1-201ENST00000378078 CDHR2Q9BYE9 1310 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 FFAR3O14843 346 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 GPR42O15529 346 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 COX7A2P14406 83 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 MYL12AP19105 171 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 ADCYAP1R1P41586 468 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 ABL2P42684 1182 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 ZNF484Q5JVG2 852 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 PGBD2Q6P3X8 592 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 RAD51AP1Q96B01 352 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 CXorf40BQ96DE9 158 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 TBL1YQ9BQ87 522 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 RAD51BO15315 384 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 IGSF6O95976 241 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 NDUFAF6Q330K2 333 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 HGH1Q9BTY7 390 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 XYLBO75191 536 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 VDRP11473 427 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 MRPS35P82673 323 aaKnown RBP16.64■□□□□ 0.25
RGP1-201ENST00000378078 ATG10Q9H0Y0 220 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 CISHQ9NSE2 258 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 CCDC167Q9P0B6 97 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 MYPNQ86TC9 1320 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 CRB1P82279 1406 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 MAP3K4Q9Y6R4 1608 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 A0A0B4J269 797 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 NT5C1B-RDH14C9J2C7 533 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 GUCY1B2O75343 617 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 GSTM5P46439 218 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 OMA1Q96E52 524 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 DAPK2Q9UIK4 370 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 ATXN2Q99700 1313 aaKnown RBP16.64■□□□□ 0.25
RGP1-201ENST00000378078 A0A0A6YYK5 440 aaPredicted RBP16.64■□□□□ 0.25
RGP1-201ENST00000378078 TIMM44O43615 452 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 CENPCQ03188 943 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 SCIMPQ6UWF3 145 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 TSPAN14Q8NG11 270 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 RERGQ96A58 199 aaPredicted RBP16.64■□□□□ 0.25
RGP1-201ENST00000378078 SYT15Q9BQS2 421 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 PRKD2Q9BZL6 878 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 OGDHLQ9ULD0 1010 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 TAF6LQ9Y6J9 622 aa16.64■□□□□ 0.25
RGP1-201ENST00000378078 C1orf232A0A0U1RR37 186 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 CCDC189A1A4V9 331 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 KCNMA1Q12791 1236 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 TMC5Q6UXY8 1006 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 MCOLN3Q8TDD5 553 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 RNF145Q96MT1 663 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 DGCR6LQ9BY27 220 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 TMPRSS4Q9NRS4 437 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 AHSPQ9NZD4 102 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 LRCH1Q9Y2L9 728 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 ZNF609O15014 1411 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 LOC100506127A0A0U1RQW1 187 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 MYL12BO14950 172 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 ARF4P18085 180 aaPredicted RBP16.63■□□□□ 0.25
RGP1-201ENST00000378078 STX5Q13190 355 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 SUZ12Q15022 739 aaKnown RBP16.63■□□□□ 0.25
RGP1-201ENST00000378078 SCUBE1Q8IWY4 988 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 ISCA1Q9BUE6 129 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 LRRC40Q9H9A6 602 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 A0A1W2PQC6 194 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 PRODHO43272 600 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 PPP1R37O75864 691 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 BMP10O95393 424 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 LSP1P33241 339 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 SERPINH1P50454 418 aaKnown RBP16.63■□□□□ 0.25
RGP1-201ENST00000378078 OR6K2Q8NGY2 324 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 TRNT1Q96Q11 434 aaKnown RBP16.63■□□□□ 0.25
RGP1-201ENST00000378078 TKTL2Q9H0I9 626 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 TRIM66O15016 1216 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 MTSS1O43312 755 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 CYP2A6P11509 494 aaPredicted RBP16.63■□□□□ 0.25
RGP1-201ENST00000378078 INSRRP14616 1297 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 HPCAL1P37235 193 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 OLFML2AQ68BL7 652 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 SPATA6LQ8N4H0 392 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 ALLCQ8N6M5 410 aa16.63■□□□□ 0.25
RGP1-201ENST00000378078 HMX1Q9NP08 348 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms