RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 ENTPD3O75355 529 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 ATG7O95352 703 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 MPSTP25325 297 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 CDH5P33151 784 aaPredicted RBP16.26■□□□□ 0.19
CKAP4-201ENST00000378026 PTGER2P43116 358 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 GBE1Q04446 702 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 STILQ15468 1287 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 STRIP1Q5VSL9 837 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 TICAM1Q8IUC6 712 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 FNIP1Q8TF40 1166 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 MAML3Q96JK9 1138 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 TWNKQ96RR1 684 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 FERMT1Q9BQL6 677 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 HAUS8Q9BT25 410 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 TRPV6Q9H1D0 765 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 CAB39LQ9H9S4 337 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 C20orf96Q9NUD7 363 aaPredicted RBP16.26■□□□□ 0.19
CKAP4-201ENST00000378026 FZD1Q9UP38 647 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 PSAPP07602 524 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 IL4RP24394 825 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 MGAT1P26572 445 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 ABCD1P33897 745 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 DLG2Q15700 870 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 SLC9A4Q6AI14 798 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 BBS5Q8N3I7 341 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 CDKL2Q92772 493 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 ERLEC1Q96DZ1 483 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 PCDHAC1Q9H158 963 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 WDR41Q9HAD4 459 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 FAIMQ9NVQ4 179 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 MOCS1Q9NZB8 636 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 CDY2AQ9Y6F7 541 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 CDY1Q9Y6F8 540 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 STYXL1Q9Y6J8 313 aa16.26■□□□□ 0.19
CKAP4-201ENST00000378026 RGSL1A5PLK6 1076 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 MX2P20592 715 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 SAT1P21673 171 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 ASPAP45381 313 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 RGS7P49802 495 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 BAATQ14032 418 aaPredicted RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 DUOXA2Q1HG44 320 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 MGAT5BQ3V5L5 792 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 PIGGQ5H8A4 983 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 TIFABQ6ZNK6 161 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 CYP4V2Q6ZWL3 525 aaPredicted RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 LRTOMTQ8WZ04 291 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 FRMD8Q9BZ67 464 aaPredicted RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 GCOM2Q9BZD3 368 aaPredicted RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 FAM96AQ9H5X1 160 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 CROCCQ5TZA2 2017 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 H0YCG3 227 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 PLOD2O00469 737 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 XPOTO43592 962 aaKnown RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 GPD1P21695 349 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 ME2P23368 584 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 HARS2P49590 506 aaKnown RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 CDK9P50750 372 aaKnown RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 SLC5A3P53794 718 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 LSM12Q3MHD2 195 aaKnown RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 PCDH20Q8N6Y1 951 aaKnown RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 LRRC39Q96DD0 335 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 PAIP1Q9H074 479 aaKnown RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 TUT1Q9H6E5 874 aaKnown RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 INIPQ9NRY2 104 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 HES2Q9Y543 173 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 SNX13Q9Y5W8 968 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 SEC24DO94855 1032 aaPredicted RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 LTFP02788 710 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 ZNF23P17027 643 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 ACTR2P61160 394 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 IRF9Q00978 393 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 ZFP1Q6P2D0 407 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 RNF169Q8NCN4 708 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 ACO2Q99798 780 aaKnown RBP16.25■□□□□ 0.19
CKAP4-201ENST00000378026 CIB1Q99828 191 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 TMEM39BQ9GZU3 492 aa16.25■□□□□ 0.19
CKAP4-201ENST00000378026 MICAL2O94851 1124 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 ENPEPQ07075 957 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 OLIG2Q13516 323 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 BORAQ6PGQ7 559 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 FASTKD5Q7L8L6 764 aaKnown RBP16.24■□□□□ 0.19
CKAP4-201ENST00000378026 C8orf37Q96NL8 207 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 YIPF2Q9BWQ6 316 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 PRPF19Q9UMS4 504 aaKnown RBP16.24■□□□□ 0.19
CKAP4-201ENST00000378026 PCDHB12Q9Y5F1 795 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 H6PDO95479 791 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 NR3C2P08235 984 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 ETFBP38117 255 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 CYP2R1Q6VVX0 501 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 TMEM102Q8N9M5 508 aaPredicted RBP16.24■□□□□ 0.19
CKAP4-201ENST00000378026 SLC4A11Q8NBS3 891 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 SLC29A1Q99808 456 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 OSBPL6Q9BZF3 934 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 PLGRKTQ9HBL7 147 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 JPH1Q9HDC5 661 aaPredicted RBP16.24■□□□□ 0.19
CKAP4-201ENST00000378026 SNX15Q9NRS6 342 aa16.24■□□□□ 0.19
CKAP4-201ENST00000378026 PRSS51A0A1B0GVH4 220 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 SH3PXD2BA1X283 911 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 TMEM221A6NGB7 291 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 MED7O43513 233 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 491.7 ms