RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 TFE3P19532 575 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 SDHBP21912 280 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 CSKP41240 450 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 NSFP46459 744 aaKnown RBP11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 GABRB2P47870 512 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 TPM4P67936 248 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 PUM1Q14671 1186 aaKnown RBP eCLIP11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 KLHL40Q2TBA0 621 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 RNF219Q5W0B1 726 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 LYSMD4Q5XG99 296 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 APTXQ7Z2E3 356 aaKnown RBP11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 TMPRSS6Q8IU80 811 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 SLC30A5Q8TAD4 765 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 FIBINQ8TAL6 211 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 NETO1Q8TDF5 533 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 PRCCQ92733 491 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 SIPA1Q96FS4 1042 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 ERGIC2Q96RQ1 377 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 TBCBQ99426 244 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 TKTL2Q9H0I9 626 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 WDCPQ9H6R7 721 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 PIGVQ9NUD9 493 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 RRN3Q9NYV6 651 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 VANGL2Q9ULK5 521 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 THADAQ6YHU6 1953 aa11.96□□□□□ -0.5
SMARCE1-203ENST00000377808 DNAH14Q0VDD8 3507 aa11.96□□□□□ -0.5
SMARCE1-203ENST00000377808 IGHV1OR15-9A0A0B4J2B8 117 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 BCLAF3A2AJT9 711 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 LRRC10BA6NIK2 292 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 TEX33O43247 280 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 FOXD2O60548 495 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 ZNF806P0C7X5 589 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 PDGFRAP16234 1089 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 CHRNB2P17787 502 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 PTMSP20962 102 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 FLT3P36888 993 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 PTGER3P43115 390 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 ATXN1P54253 815 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 CENPCQ03188 943 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 CDO1Q16878 200 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 FSCBQ5H9T9 825 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 PITRM1Q5JRX3 1037 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 TTC39BQ5VTQ0 682 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 TRIM72Q6ZMU5 477 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 EMC1Q8N766 993 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 CFAP57Q96MR6 1250 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 MKRN2Q9H000 416 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 CD248Q9HCU0 757 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 KIAA1522Q9P206 1035 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 PAXBP1Q9Y5B6 917 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 SNX10Q9Y5X0 201 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 HS3ST4Q9Y661 456 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 ABCA7Q8IZY2 2146 aa11.95□□□□□ -0.5
SMARCE1-203ENST00000377808 A0A1B0GVM2 712 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 TCAF2A6NFQ2 919 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 MEI4A8MW99 385 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 PATE3B3GLJ2 98 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 KHNYNO15037 678 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 PAGE1O75459 146 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 ADCY5O95622 1261 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 CYP1A1P04798 512 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 CCDC172P0C7W6 258 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 RDXP35241 583 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 SCNN1AP37088 669 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 CTSOP43234 321 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 COPAP53621 1224 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 ATP11AP98196 1134 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 MTA1Q13330 715 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 EIF4EBP2Q13542 120 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 ENPP2Q13822 863 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 AUHQ13825 339 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 PTPRNQ16849 979 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 SLC25A52Q3SY17 297 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 BRMS1LQ5PSV4 323 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 PLA2G2CQ5R387 149 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 OTUD1Q5VV17 481 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 IL31Q6EBC2 164 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 FBXL22Q6P050 247 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 KIAA0907Q7Z7F0 614 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 FAM124AQ86V42 546 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 RGL4Q8IZJ4 473 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 CCAR2Q8N163 923 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 OR2T3Q8NH03 318 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 GANCQ8TET4 914 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 IGSF8Q969P0 613 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 TOE1Q96GM8 510 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 HSPA12BQ96MM6 686 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 PCDHB18PQ96TA0 734 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 NPY6RQ99463 290 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 PRMT1Q99873 361 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 EDEM2Q9BV94 578 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 SELENOOQ9BVL4 669 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 ADAM33Q9BZ11 813 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 MTG2Q9H4K7 406 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 RTN4Q9NQC3 1192 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 RXFP3Q9NSD7 469 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 ADAM22Q9P0K1 906 aa11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 INTS6Q9UL03 887 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-203ENST00000377808 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms