RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 KCNK16Q96T55 309 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 C11orf84Q9BUA3 381 aaPredicted RBP16.68■□□□□ 0.26
TRIM27-202ENST00000377199 PACSIN3Q9UKS6 424 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 DPPA5A6NC42 116 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 GPR32O75388 356 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 CIB2O75838 187 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 HIC1Q14526 733 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 SLC25A52Q3SY17 297 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 RALGPS1Q5JS13 557 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 TWF2Q6IBS0 349 aaKnown RBP16.68■□□□□ 0.26
TRIM27-202ENST00000377199 ARHGAP24Q8N264 748 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 ARRDC4Q8NCT1 418 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 SGIP1Q9BQI5 828 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 PLEKHA5Q9HAU0 1116 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 DLGAP2Q9P1A6 1054 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 TREHO43280 583 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 DGKIO75912 1065 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 FGF3P11487 239 aaPredicted RBP16.68■□□□□ 0.26
TRIM27-202ENST00000377199 TKTL1P51854 596 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 HSP90AA5PQ58FG0 334 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 EFHC1Q5JVL4 640 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 USP33Q8TEY7 942 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 MFSD3Q96ES6 412 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 ZNF333Q96JL9 665 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 FCRL3Q96P31 734 aaPredicted RBP16.68■□□□□ 0.26
TRIM27-202ENST00000377199 OLFM3Q96PB7 478 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 SLC7A8Q9UHI5 535 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 APOBEC2Q9Y235 224 aaKnown RBP16.68■□□□□ 0.26
TRIM27-202ENST00000377199 USP3Q9Y6I4 520 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 ENO4A6NNW6 628 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 NRP1O14786 923 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 PLIN3O60664 434 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 SNNO75324 88 aaPredicted RBP16.67■□□□□ 0.26
TRIM27-202ENST00000377199 ARRB2P32121 409 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 WASHC5Q12768 1159 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 PCLAFQ15004 111 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 MBLAC2Q68D91 279 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 PLD6Q8N2A8 252 aaKnown RBP16.67■□□□□ 0.26
TRIM27-202ENST00000377199 PPFIBP2Q8ND30 876 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 PPP4R1Q8TF05 950 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 CELF6Q96J87 481 aaKnown RBP16.67■□□□□ 0.26
TRIM27-202ENST00000377199 PANX3Q96QZ0 392 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 RHOBTB2Q9BYZ6 727 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 ANLNQ9NQW6 1124 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 KRT82Q9NSB4 513 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 MORF4L1Q9UBU8 362 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 GSRP00390 522 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 NCAM1P13591 858 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 DARSP14868 501 aaKnown RBP16.67■□□□□ 0.26
TRIM27-202ENST00000377199 PGAM1P18669 254 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 FDFT1P37268 417 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 AFF1P51825 1210 aaKnown RBP16.67■□□□□ 0.26
TRIM27-202ENST00000377199 LILRA4P59901 499 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 IRF9Q00978 393 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 BEX3Q00994 111 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 PAN2Q504Q3 1202 aaKnown RBP16.67■□□□□ 0.26
TRIM27-202ENST00000377199 CERCAMQ5T4B2 595 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 TEDDM1Q5T9Z0 273 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 DPY19L2Q6NUT2 758 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 LRRC8BQ6P9F7 803 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 STRA8Q7Z7C7 330 aa16.67■□□□□ 0.26
TRIM27-202ENST00000377199 CCL15-CCL14A0A0B4J2E2 113 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 BTBD19C9JJ37 291 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 E7ENQ6 273 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 GLRA3O75311 464 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 POLBP06746 335 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 ERCC2P18074 760 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 CCL15Q16663 113 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 EML3Q32P44 896 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 DUSP28Q4G0W2 176 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 OTUD1Q5VV17 481 aaPredicted RBP16.66■□□□□ 0.26
TRIM27-202ENST00000377199 KDELC2Q7Z4H8 507 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 GPR142Q7Z601 462 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 SPNS2Q8IVW8 549 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 DCLK2Q8N568 766 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 PYDC1Q8WXC3 89 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 CERS2Q96G23 380 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 FERMT1Q9BQL6 677 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 CCDC106Q9BWC9 280 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 ULBP1Q9BZM6 244 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 KATNBL1Q9H079 304 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 YJEFN3A6XGL0 299 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 E9PBE3 544 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 PIRO00625 290 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 KLHL41O60662 606 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 USP17L7P0C7H9 530 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 KLC1Q07866 573 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 NIPAL4Q0D2K0 466 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 C6orf163Q5TEZ5 329 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 STRADAQ7RTN6 431 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 KBTBD2Q8IY47 623 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 MAML3Q96JK9 1138 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 TNIP3Q96KP6 325 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 ZNF560Q96MR9 790 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 DDX50Q9BQ39 737 aaKnown RBP16.66■□□□□ 0.26
TRIM27-202ENST00000377199 SYT15Q9BQS2 421 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 SNX15Q9NRS6 342 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 COL1A2P08123 1366 aa16.66■□□□□ 0.26
TRIM27-202ENST00000377199 GOLGA8QA0A0J9YX86 632 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms