RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 TPMTP51580 245 aa17.75■□□□□ 0.43
USP11-202ENST00000377078 COPAP53621 1224 aa17.75■□□□□ 0.43
USP11-202ENST00000377078 OXCT1P55809 520 aa17.75■□□□□ 0.43
USP11-202ENST00000377078 PTPN20Q4JDL3 420 aa17.75■□□□□ 0.43
USP11-202ENST00000377078 RNF219Q5W0B1 726 aaPredicted RBP17.75■□□□□ 0.43
USP11-202ENST00000377078 OLFML1Q6UWY5 402 aa17.75■□□□□ 0.43
USP11-202ENST00000377078 SND1Q7KZF4 910 aaKnown RBP eCLIP17.75■□□□□ 0.43
USP11-202ENST00000377078 CFAP52Q8N1V2 620 aa17.75■□□□□ 0.43
USP11-202ENST00000377078 CADM4Q8NFZ8 388 aa17.75■□□□□ 0.43
USP11-202ENST00000377078 WFDC5Q8TCV5 224 aa17.75■□□□□ 0.43
USP11-202ENST00000377078 ZNF419Q96HQ0 510 aaPredicted RBP17.75■□□□□ 0.43
USP11-202ENST00000377078 VPS16Q9H269 839 aa17.75■□□□□ 0.43
USP11-202ENST00000377078 TMEM74BQ9NUR3 256 aa17.75■□□□□ 0.43
USP11-202ENST00000377078 STAP1Q9ULZ2 295 aa17.75■□□□□ 0.43
USP11-202ENST00000377078 DAAM1Q9Y4D1 1078 aa17.75■□□□□ 0.43
USP11-202ENST00000377078 F8VZ95 297 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 TM4SF5O14894 197 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 DNTTP04053 509 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 SYPP08247 313 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 ADRB1P08588 477 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 SERPINF2P08697 491 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 CSKP41240 450 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 ZBTB16Q05516 673 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 SFSWAPQ12872 951 aaKnown RBP17.74■□□□□ 0.43
USP11-202ENST00000377078 NME3Q13232 169 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 SLC12A1Q13621 1099 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 PTPRNQ16849 979 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 TTC31Q49AM3 519 aaPredicted RBP17.74■□□□□ 0.43
USP11-202ENST00000377078 CDKAL1Q5VV42 579 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 ERICH1Q86X53 443 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 CACUL1Q86Y37 369 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 KDM1BQ8NB78 822 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 ZNF397Q8NF99 534 aaPredicted RBP17.74■□□□□ 0.43
USP11-202ENST00000377078 TTC17Q96AE7 1141 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 C18orf8Q96DM3 657 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 PPP1R9BQ96SB3 815 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 GPR174Q9BXC1 333 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 WSB2Q9NYS7 404 aaPredicted RBP17.74■□□□□ 0.43
USP11-202ENST00000377078 CNOT1A5YKK6 2376 aaKnown RBP17.74■□□□□ 0.43
USP11-202ENST00000377078 GON4LQ3T8J9 2241 aa17.74■□□□□ 0.43
USP11-202ENST00000377078 A0A1B0GVM2 712 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 TCAF2A6NFQ2 919 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 RNASEH1O60930 286 aaKnown RBP17.73■□□□□ 0.43
USP11-202ENST00000377078 IGLV3-19P01714 112 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 ENGP17813 658 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 CDH5P33151 784 aaPredicted RBP17.73■□□□□ 0.43
USP11-202ENST00000377078 NNMTP40261 264 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 MAPK8P45983 427 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 MYL5Q02045 173 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 KRT31Q15323 416 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 UAP1L1Q3KQV9 507 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 CCDC183Q5T5S1 534 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 TAF3Q5VWG9 929 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 LRSAM1Q6UWE0 723 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 ZNF677Q86XU0 584 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 SLC41A1Q8IVJ1 513 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 ZNF366Q8N895 744 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 PCMTD1Q96MG8 357 aaPredicted RBP17.73■□□□□ 0.43
USP11-202ENST00000377078 NAA15Q9BXJ9 866 aaKnown RBP17.73■□□□□ 0.43
USP11-202ENST00000377078 PCED1AQ9H1Q7 454 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 CD93Q9NPY3 652 aa17.73■□□□□ 0.43
USP11-202ENST00000377078 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.73■□□□□ 0.43
USP11-202ENST00000377078 XPO7Q9UIA9 1087 aaKnown RBP17.73■□□□□ 0.43
USP11-202ENST00000377078 CKAP5Q14008 2032 aa17.72■□□□□ 0.43
USP11-202ENST00000377078 M0QYT0 321 aa17.72■□□□□ 0.43
USP11-202ENST00000377078 SRPRAP08240 638 aaKnown RBP17.72■□□□□ 0.43
USP11-202ENST00000377078 SCNN1AP37088 669 aa17.72■□□□□ 0.43
USP11-202ENST00000377078 MATKP42679 507 aa17.72■□□□□ 0.43
USP11-202ENST00000377078 RNASE9P60153 205 aaKnown RBP17.72■□□□□ 0.43
USP11-202ENST00000377078 PITX1P78337 314 aaPredicted RBP17.72■□□□□ 0.43
USP11-202ENST00000377078 SULT2A1Q06520 285 aa17.72■□□□□ 0.43
USP11-202ENST00000377078 EIF4EBP2Q13542 120 aaPredicted RBP17.72■□□□□ 0.43
USP11-202ENST00000377078 PITRM1Q5JRX3 1037 aa17.72■□□□□ 0.43
USP11-202ENST00000377078 FAM102AQ5T9C2 384 aaPredicted RBP17.72■□□□□ 0.43
USP11-202ENST00000377078 ZNF776Q68DI1 518 aaPredicted RBP17.72■□□□□ 0.43
USP11-202ENST00000377078 DPY19L2P1Q6NXN4 242 aa17.72■□□□□ 0.43
USP11-202ENST00000377078 HDDC3Q8N4P3 179 aa17.72■□□□□ 0.43
USP11-202ENST00000377078 RPRD1AQ96P16 312 aaPredicted RBP17.72■□□□□ 0.43
USP11-202ENST00000377078 SPAG5Q96R06 1193 aa17.72■□□□□ 0.43
USP11-202ENST00000377078 GTPBP2Q9BX10 602 aaKnown RBP17.72■□□□□ 0.43
USP11-202ENST00000377078 FAM207AQ9NSI2 230 aaPredicted RBP17.72■□□□□ 0.43
USP11-202ENST00000377078 FANCLQ9NW38 375 aa17.72■□□□□ 0.43
USP11-202ENST00000377078 TNRC6BQ9UPQ9 1833 aaKnown RBP17.72■□□□□ 0.43
USP11-202ENST00000377078 CDX4O14627 284 aaPredicted RBP17.71■□□□□ 0.43
USP11-202ENST00000377078 KCNK5O95279 499 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 F9P00740 461 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 CDK11BP21127 795 aaKnown RBP17.71■□□□□ 0.43
USP11-202ENST00000377078 NOVA1P51513 510 aaKnown RBP17.71■□□□□ 0.43
USP11-202ENST00000377078 POLR2FP61218 127 aaKnown RBP17.71■□□□□ 0.43
USP11-202ENST00000377078 ECT2LQ008S8 904 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 HNRNPA1L2Q32P51 320 aaKnown RBP17.71■□□□□ 0.43
USP11-202ENST00000377078 PLEKHG6Q3KR16 790 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 FSCBQ5H9T9 825 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 BRMS1LQ5PSV4 323 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 ACBD5Q5T8D3 534 aaPredicted RBP17.71■□□□□ 0.43
USP11-202ENST00000377078 EPS8L1Q8TE68 723 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 MYEOVQ96EZ4 313 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 LMLNQ96KR4 655 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 NAT10Q9H0A0 1025 aaKnown RBP17.71■□□□□ 0.43
USP11-202ENST00000377078 SLC32A1Q9H598 525 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms