RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 MYLPFQ96A32 169 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 CDH9Q9ULB4 789 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 CCT8L1PA6NM43 557 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 ARHGEF9O43307 516 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 TBL1XO60907 577 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 USP1O94782 785 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 CRYBB1P53674 252 aaPredicted RBP13.91□□□□□ -0.18
GPC6-201ENST00000377047 AQP5P55064 265 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 HLA-DQA1Q5Y7H0 255 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 MARK2Q7KZI7 788 aaKnown RBP13.91□□□□□ -0.18
GPC6-201ENST00000377047 PIK3R5Q8WYR1 880 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 MTMR9Q96QG7 549 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 TRDMT1O14717 391 aaKnown RBP13.91□□□□□ -0.18
GPC6-201ENST00000377047 CALCAP01258 141 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 GTF2E2P29084 291 aaKnown RBP13.91□□□□□ -0.18
GPC6-201ENST00000377047 KCNT2Q6UVM3 1135 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 MFSD7Q6UXD7 560 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 PARVBQ9HBI1 364 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 PTPRHQ9HD43 1115 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 BAIAP3O94812 1187 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 PRLRP16471 622 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 NOS2P35228 1153 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 INSCQ1MX18 579 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 ACO2Q99798 780 aaKnown RBP13.91□□□□□ -0.18
GPC6-201ENST00000377047 IGF2BP3O00425 579 aaKnown RBP eCLIP13.91□□□□□ -0.18
GPC6-201ENST00000377047 MEIS2O14770 477 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 GJB1P08034 283 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 TBL3Q12788 808 aaKnown RBP13.91□□□□□ -0.18
GPC6-201ENST00000377047 DAB2IPQ5VWQ8 1189 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 UNC93AQ86WB7 457 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 WNT8BQ93098 351 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 MIR1-1HGQ9H1L0 117 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 TUBGCP4Q9UGJ1 667 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 ZNF112Q9UJU3 913 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 POU1F1P28069 291 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 TNFSF9P41273 254 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 THAP11Q96EK4 314 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 PANX3Q96QZ0 392 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 C2orf49Q9BVC5 232 aaPredicted RBP13.9□□□□□ -0.18
GPC6-201ENST00000377047 KCNMB3Q9NPA1 279 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 OR12D3Q9UGF7 316 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 TMEM114B3SHH9 223 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 PYGMP11217 842 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 ZNF23P17027 643 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 CHRNB3Q05901 458 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 DET1Q7L5Y6 550 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 FBXL16Q8N461 479 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 OSBPL10Q9BXB5 764 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 ZMYM5Q9UJ78 669 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 IFNA14P01570 189 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 CCDC159P0C7I6 412 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 CAPSQ13938 189 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 C15orf59Q2T9L4 293 aaPredicted RBP13.9□□□□□ -0.18
GPC6-201ENST00000377047 WDR59Q6PJI9 974 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 C18orf25Q96B23 403 aaPredicted RBP13.9□□□□□ -0.18
GPC6-201ENST00000377047 TOMM70O94826 608 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 PDPK2PQ6A1A2 396 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 FAM183BPQ6ZVS7 135 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 LRRC8DQ7L1W4 858 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 IL31RAQ8NI17 732 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 DUSP9Q99956 384 aaKnown RBP13.9□□□□□ -0.18
GPC6-201ENST00000377047 CDT1Q9H211 546 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 SLC24A2Q9UI40 661 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 PCDHA3Q9Y5H8 950 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 SPATA31C2B4DYI2 1134 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 SLCO1B7G3V0H7 640 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 BTN3A1O00481 513 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 CXCL14O95715 111 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 PSMA3P25788 255 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 CLK1P49759 484 aaKnown RBP13.9□□□□□ -0.18
GPC6-201ENST00000377047 PSMD5Q16401 504 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 N4BP2L1Q5TBK1 243 aaPredicted RBP13.9□□□□□ -0.18
GPC6-201ENST00000377047 SDHAF4Q5VUM1 108 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 OSCP1Q8WVF1 389 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 DPY30Q9C005 99 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 NMRAL1Q9HBL8 299 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 MPP6Q9NZW5 540 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 POLG2Q9UHN1 485 aa13.9□□□□□ -0.18
GPC6-201ENST00000377047 NT5C1B-RDH14C9J2C7 533 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 BMP10O95393 424 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 CSH1P0DML2 217 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 CSH2P0DML3 217 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 CRABP2P29373 138 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 SNRPD1P62314 119 aaKnown RBP13.89□□□□□ -0.19
GPC6-201ENST00000377047 PLPP4Q5VZY2 271 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 PAPD7Q5XG87 772 aaKnown RBP13.89□□□□□ -0.19
GPC6-201ENST00000377047 SERPINA13PQ6UXR4 307 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 VN1R5Q7Z5H4 357 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 CAMKK1Q8N5S9 505 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 CRYL1Q9Y2S2 319 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 SMIM22K7EJ46 135 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 XPO1O14980 1071 aaKnown RBP13.89□□□□□ -0.19
GPC6-201ENST00000377047 FGF10O15520 208 aaPredicted RBP13.89□□□□□ -0.19
GPC6-201ENST00000377047 NEK2P51955 445 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 MARSP56192 900 aaKnown RBP13.89□□□□□ -0.19
GPC6-201ENST00000377047 TRIM69Q86WT6 500 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 FAM120BQ96EK7 910 aaKnown RBP13.89□□□□□ -0.19
GPC6-201ENST00000377047 PAWRQ96IZ0 340 aaKnown RBP13.89□□□□□ -0.19
GPC6-201ENST00000377047 CPNE1Q99829 537 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 HIPK3Q9H422 1215 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms