RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 NMUR1Q9HB89 426 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 IL21RQ9HBE5 538 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 OSGEPQ9NPF4 335 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 TOR4AQ9NXH8 423 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 PLK2Q9NYY3 685 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 CLIC5Q9NZA1 410 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 TSPAN16Q9UKR8 245 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 FNDC3AQ9Y2H6 1198 aaKnown RBP12.67□□□□□ -0.38
LSM2-208ENST00000375661 ITPR1Q14643 2758 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 CYBBP04839 570 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 GNA15P30679 374 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 SOX5P35711 763 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 STAT1P42224 750 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 AFF3P51826 1226 aaKnown RBP12.66□□□□□ -0.38
LSM2-208ENST00000375661 KIF11P52732 1056 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 COPAP53621 1224 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 ZNF234Q14588 700 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 CNGA2Q16280 664 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 GOLGA7BQ2TAP0 167 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 PKDCCQ504Y2 493 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 FIGNQ5HY92 759 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 LCLAT1Q6UWP7 414 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 SLC47A2Q86VL8 602 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 SCUBE3Q8IX30 993 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 CPXM2Q8N436 756 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 ANKRD52Q8NB46 1076 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 C1orf216Q8TAB5 229 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 RHBDD1Q8TEB9 315 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 HNRNPLLQ8WVV9 542 aaKnown RBP12.66□□□□□ -0.38
LSM2-208ENST00000375661 ZNF606Q8WXB4 792 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 BHMTQ93088 406 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 DUSP16Q9BY84 665 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 ELOVL2Q9NXB9 296 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 EIF2B4Q9UI10 523 aaKnown RBP12.66□□□□□ -0.38
LSM2-208ENST00000375661 NAGPAQ9UK23 515 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.66□□□□□ -0.38
LSM2-208ENST00000375661 RAXQ9Y2V3 346 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 USP3Q9Y6I4 520 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 SHROOM3Q8TF72 1996 aa12.66□□□□□ -0.38
LSM2-208ENST00000375661 COL5A1P20908 1838 aaPredicted RBP12.66□□□□□ -0.38
LSM2-208ENST00000375661 MUC22E2RYF6 1773 aaPredicted RBP12.66□□□□□ -0.38
LSM2-208ENST00000375661 ITIH6Q6UXX5 1313 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 A0A087WV48 116 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 MDM4O15151 490 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 TNFSF14O43557 240 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 GFPT2O94808 682 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 KLKB1P03952 638 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 TPM3P06753 285 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 ATXN1LP0C7T5 689 aaKnown RBP12.65□□□□□ -0.38
LSM2-208ENST00000375661 CYP11B1P15538 503 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 PTK2Q05397 1052 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 PDE4CQ08493 712 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 STILQ15468 1287 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 TEAD4Q15561 434 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 SCD5Q86SK9 330 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 VSTM4Q8IW00 320 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 OR2T3Q8NH03 318 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 UBA3Q8TBC4 463 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 SPAG5Q96R06 1193 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 EDEM3Q9BZQ6 932 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 TRIM5Q9C035 493 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 FBRSQ9HAH7 460 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 NUDT5Q9UKK9 219 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 CABIN1Q9Y6J0 2220 aa12.65□□□□□ -0.38
LSM2-208ENST00000375661 URB1O60287 2271 aaKnown RBP12.64□□□□□ -0.39
LSM2-208ENST00000375661 APC2O95996 2303 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 EIF4E1BA6NMX2 242 aaKnown RBP12.64□□□□□ -0.39
LSM2-208ENST00000375661 TULP2O00295 520 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 THAP12O43422 761 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 PCDHGA12O60330 932 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 DFNA5O60443 496 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 GYPCP04921 128 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 PRKCHP24723 683 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 CORO1AP31146 461 aaKnown RBP12.64□□□□□ -0.39
LSM2-208ENST00000375661 GRIA4P48058 902 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 ZNF75DP51815 510 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 BPIFB4P59827 614 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 ARID5AQ03989 594 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 CAMK2GQ13555 558 aaPredicted RBP12.64□□□□□ -0.39
LSM2-208ENST00000375661 E4F1Q66K89 784 aaPredicted RBP12.64□□□□□ -0.39
LSM2-208ENST00000375661 DENND1BQ6P3S1 775 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 SERPINA13PQ6UXR4 307 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 NOP9Q86U38 636 aaKnown RBP12.64□□□□□ -0.39
LSM2-208ENST00000375661 FAM217AQ8IXS0 508 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 ARHGAP18Q8N392 663 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 PDCD7Q8N8D1 485 aaKnown RBP12.64□□□□□ -0.39
LSM2-208ENST00000375661 EPS8L1Q8TE68 723 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 IGSF8Q969P0 613 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 P2RY11Q96G91 374 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 UBXN6Q9BZV1 441 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 AGO1Q9UL18 857 aaKnown RBP12.64□□□□□ -0.39
LSM2-208ENST00000375661 STRIP2Q9ULQ0 834 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 MYO6Q9UM54 1294 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 NUMA1Q14980 2115 aa12.64□□□□□ -0.39
LSM2-208ENST00000375661 A0A1B0GVT2 93 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 A0A1W2PQJ5 194 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 TRABD2BA6NFA1 517 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 LRRC53A6NM62 1247 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 M0QYV0 167 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 PAPSS1O43252 624 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms