RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 RAB27AP51159 221 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 IFI35P80217 286 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-203ENST00000375604 SEMA6AQ9H2E6 1030 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 SLC9A8Q9Y2E8 581 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 ELNP15502 786 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 PTPN1P18031 435 aaKnown RBP17.51■□□□□ 0.39
MCF2L-203ENST00000375604 CD151P48509 253 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 PFKPQ01813 784 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 KLC1Q07866 573 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 STX5Q13190 355 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 UTP15Q8TED0 518 aaKnown RBP17.51■□□□□ 0.39
MCF2L-203ENST00000375604 CYP39A1Q9NYL5 469 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 KRT8P05787 483 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 FGFR3P22607 806 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 RUNX1T1Q06455 604 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 IL17AQ16552 155 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 CDKAL1Q5VV42 579 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 OMDQ99983 421 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 PPCSQ9HAB8 311 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 CTPS1P17812 591 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 CYP2A7P20853 494 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 FAAP100Q0VG06 881 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 GALNT3Q14435 633 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 COMMD2Q86X83 199 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 DEFB107AQ8IZN7 70 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.5■□□□□ 0.391e-6■■■■■ 56.2
MCF2L-203ENST00000375604 TINF2Q9BSI4 451 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 H3BQF6 201 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 MAXP61244 160 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 KIAA1324Q6UXG2 1013 aaKnown RBP17.5■□□□□ 0.39
MCF2L-203ENST00000375604 CYP2R1Q6VVX0 501 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 FBXO6Q9NRD1 293 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-203ENST00000375604 ZNHIT2Q9UHR6 403 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 TGFB3P10600 412 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 GZMAP12544 262 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 CCND1P24385 295 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 NFE2Q16621 373 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-203ENST00000375604 CYP20A1Q6UW02 462 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 USP50Q70EL3 339 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-203ENST00000375604 OR52K1Q8NGK4 314 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 COL26A1Q96A83 441 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 ANKZF1Q9H8Y5 726 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 POPDC2Q9HBU9 364 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 OLFML3Q9NRN5 406 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 MMP13P45452 471 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 PLA2G4EQ3MJ16 856 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 FBXO39Q8N4B4 442 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 OR6K2Q8NGY2 324 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 EFCAB1Q9HAE3 211 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 UBA2Q9UBT2 640 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-203ENST00000375604 KIDINS220Q9ULH0 1771 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 NQO1P15559 274 aaKnown RBP17.5■□□□□ 0.39
MCF2L-203ENST00000375604 CCT8P50990 548 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 C1QBPQ07021 282 aaKnown RBP17.5■□□□□ 0.39
MCF2L-203ENST00000375604 MGAT5Q09328 741 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 ATG16L2Q8NAA4 619 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 NDRG1Q92597 394 aaKnown RBP17.5■□□□□ 0.39
MCF2L-203ENST00000375604 FAM120BQ96EK7 910 aaKnown RBP17.5■□□□□ 0.39
MCF2L-203ENST00000375604 PWWP2AQ96N64 755 aa17.5■□□□□ 0.39
MCF2L-203ENST00000375604 FRMD8P1Q9BZ68 369 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-203ENST00000375604 UBDO15205 165 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 IGSF6O95976 241 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 TPBGLP0DKB5 382 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 PGAM1P18669 254 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 CSNK2BP67870 215 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 CHRNB3Q05901 458 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 OTUD3Q5T2D3 398 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-203ENST00000375604 FBXL19Q6PCT2 694 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 FAM228AQ86W67 206 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 PPP1R14AQ96A00 147 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 LENG1Q96BZ8 264 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-203ENST00000375604 SLC4A9Q96Q91 983 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 TPP1O14773 563 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 GMFGO60234 142 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 RARGP13631 454 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 MAPK1P28482 360 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 SERPINB3P29508 390 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 HIRAP54198 1017 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-203ENST00000375604 SETD3Q86TU7 594 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-203ENST00000375604 SUGP1Q8IWZ8 645 aaKnown RBP17.49■□□□□ 0.39
MCF2L-203ENST00000375604 SPPL2AQ8TCT8 520 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 DPY30Q9C005 99 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 TMCC3Q9ULS5 477 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 DISP2A7MBM2 1401 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 BCL9O00512 1426 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 DYRK3O43781 588 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 HNF4AP41235 474 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 CDH17Q12864 832 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 AP5B1Q2VPB7 878 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 ALKBH2Q6NS38 261 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 SNRNP27Q8WVK2 155 aaKnown RBP17.49■□□□□ 0.39
MCF2L-203ENST00000375604 MYLPFQ96A32 169 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 SERPINB11Q96P15 392 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 TMEM245Q9H330 911 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 PARVBQ9HBI1 364 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 NINJ2Q9NZG7 142 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 PDE5AO76074 875 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 MPOP05164 745 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 GRTP1Q5TC63 336 aa17.49■□□□□ 0.39
MCF2L-203ENST00000375604 NFKBIL1Q9UBC1 381 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms