RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PTK7Q13308 1070 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 TARBP2Q15633 366 aaKnown RBP12.46□□□□□ -0.41
C9orf3-203ENST00000375315 DCAF6Q58WW2 860 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 C17orf99Q6UX52 265 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 RSPH3Q86UC2 560 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 PALM2Q8IXS6 379 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 GPD1LQ8N335 351 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.46□□□□□ -0.41
C9orf3-203ENST00000375315 GTF3C2Q8WUA4 911 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-203ENST00000375315 NIFKQ9BYG3 293 aaKnown RBP12.46□□□□□ -0.41
C9orf3-203ENST00000375315 PALMDQ9NP74 551 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 RBAKQ9NYW8 714 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-203ENST00000375315 ARHGAP28Q9P2N2 729 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 IQCF3P0C7M6 154 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 ZSCAN5DPP0CG00 497 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 ARL2P36404 184 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 NAMPTP43490 491 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 TFAMQ00059 246 aaKnown RBP12.46□□□□□ -0.41
C9orf3-203ENST00000375315 WASHC5Q12768 1159 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 PDK1Q15118 436 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 DUSP28Q4G0W2 176 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 RNASEH2BQ5TBB1 312 aaKnown RBP12.46□□□□□ -0.41
C9orf3-203ENST00000375315 ZFP1Q6P2D0 407 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 GPR141Q7Z602 305 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 ZBTB8OSQ8IWT0 167 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 SLC7A5P1Q8MH63 180 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 EFHD2Q96C19 240 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-203ENST00000375315 DCUN1D5Q9BTE7 237 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 GNPTGQ9UJJ9 305 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 SLC15A5A6NIM6 579 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 FAM155AB1AL88 458 aaPredicted RBP12.46□□□□□ -0.42
C9orf3-203ENST00000375315 ZNF701M0R085 212 aaPredicted RBP12.46□□□□□ -0.42
C9orf3-203ENST00000375315 EIF3FO00303 357 aaPredicted RBP12.46□□□□□ -0.42
C9orf3-203ENST00000375315 CLASP2O75122 1294 aaKnown RBP12.46□□□□□ -0.42
C9orf3-203ENST00000375315 MMP3P08254 477 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 INHBAP08476 426 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 KRT19P08727 400 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 YWHAGP61981 247 aaKnown RBP eCLIP12.46□□□□□ -0.42
C9orf3-203ENST00000375315 TUBA4AP68366 448 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 FMO1Q01740 532 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 PRKCZQ05513 592 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 CAMK2BQ13554 666 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 CHI3L2Q15782 390 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 ZNF394Q53GI3 561 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 GNASQ5JWF2 1037 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 DENND5BQ6ZUT9 1274 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 CLVS1Q8IUQ0 354 aaPredicted RBP12.46□□□□□ -0.42
C9orf3-203ENST00000375315 LMO3Q8TAP4 145 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 CMTM5Q96DZ9 223 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 FAM167AQ96KS9 214 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 UNKQ9C0B0 810 aaKnown RBP12.46□□□□□ -0.42
C9orf3-203ENST00000375315 BCAP29Q9UHQ4 241 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 TLL2Q9Y6L7 1015 aa12.46□□□□□ -0.42
C9orf3-203ENST00000375315 RBBP6Q7Z6E9 1792 aaKnown RBP12.45□□□□□ -0.42
C9orf3-203ENST00000375315 MYADML2A6NDP7 307 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 GOLGA8SH3BPF8 625 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 GOLGA8MH3BSY2 632 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 LIASO43766 372 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 PIAS1O75925 651 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 H6PDO95479 791 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 TKTP29401 623 aaKnown RBP12.45□□□□□ -0.42
C9orf3-203ENST00000375315 RPS3AP61247 264 aaKnown RBP12.45□□□□□ -0.42
C9orf3-203ENST00000375315 DGKDQ16760 1214 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 RGS21Q2M5E4 152 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 SMUG1Q53HV7 270 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 C2CD6Q53TS8 623 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 C1orf220Q5T0J3 134 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 CXCL17Q6UXB2 119 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 SCARA5Q6ZMJ2 495 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 SV2AQ7L0J3 742 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 WDR75Q8IWA0 830 aaKnown RBP12.45□□□□□ -0.42
C9orf3-203ENST00000375315 IQCF2Q8IXL9 164 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 GALNT4Q8N4A0 578 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 GLIS1Q8NBF1 620 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 SERAC1Q96JX3 654 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 C16orf70Q9BSU1 422 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 DKK3Q9UBP4 350 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 APOBEC2Q9Y235 224 aaKnown RBP12.45□□□□□ -0.42
C9orf3-203ENST00000375315 SPO11Q9Y5K1 396 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 PTPRJQ12913 1337 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 SIN3BO75182 1162 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 BANF1O75531 89 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 PABPC1P11940 636 aaKnown RBP12.45□□□□□ -0.42
C9orf3-203ENST00000375315 GRIK4Q16099 956 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 DEFB115Q30KQ5 88 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 EGFLAMQ63HQ2 1017 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 ACAD10Q6JQN1 1059 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 DCLRE1AQ6PJP8 1040 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 PCGF5Q86SE9 256 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 GPR180Q86V85 440 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 NUDCD3Q8IVD9 361 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 RHOT1Q8IXI2 618 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 OR5B17Q8NGF7 314 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 CAPNS2Q96L46 248 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 CCDC138Q96M89 665 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 OSMRQ99650 979 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 SLC2A11Q9BYW1 496 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 GCOM2Q9BZD3 368 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-203ENST00000375315 KATNBL1Q9H079 304 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 AP5M1Q9H0R1 490 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms