RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 OSER1Q9NX31 292 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SFMBT1Q9UHJ3 866 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PRDM4Q9UKN5 801 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SMG5Q9UPR3 1016 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TLR6Q9Y2C9 796 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PAGE1O75459 146 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 EFEMP2O95967 443 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CPP00450 1065 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 KRT15P19012 456 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 DRD4P21917 467 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PRKCHP24723 683 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MSH2P43246 934 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CCL23P55773 120 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MPP2Q14168 576 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 LRRC8BQ6P9F7 803 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ATAD1Q8NBU5 361 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 NETO2Q8NC67 525 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MZB1Q8WU39 189 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SLC44A1Q8WWI5 657 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 DPF3Q92784 378 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PGLYRP2Q96PD5 576 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 VAT1Q99536 393 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 EBNA1BP2Q99848 306 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PRMT1Q99873 361 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PLAC1Q9HBJ0 212 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 KCNK9Q9NPC2 374 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CLIC5Q9NZA1 410 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 RSPH14Q9UHP6 348 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 GGA2Q9UJY4 613 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TRHDEQ9UKU6 1024 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 FAM47DPA6NHR8 397 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MSI1O43347 362 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 VNN2O95498 520 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MYCP01106 439 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CPB1P15086 417 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PSMB4P28070 264 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PSEN1P49768 467 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ATN1P54259 1190 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 USP46P62068 366 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 COG7P83436 770 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 RTP2Q5QGT7 225 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SDHAF4Q5VUM1 108 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TTC9BQ8N6N2 239 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TBC1D31Q96DN5 1066 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CFAP36Q96G28 342 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SLC39A13Q96H72 371 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SGSM3Q96HU1 749 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 B3GALT6Q96L58 329 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TTPALQ9BTX7 342 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CATSPERBQ9H7T0 1116 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 NKIRAS1Q9NYS0 192 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SEPT10Q9P0V9 454 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 GMIPQ9P107 970 aa18.49■□□□□ 0.55
HLA-DQB1-201ENST00000374943 HAPLN1P10915 354 aaPredicted RBP18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SLC2A3P11169 496 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 YWHAQP27348 245 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TLE2Q04725 743 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 KBTBD12Q3ZCT8 623 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TRIM60Q495X7 471 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 STEAP4Q687X5 459 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 RSPO2Q6UXX9 243 aaPredicted RBP18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CYS1Q717R9 158 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TMEM173Q86WV6 379 aaPredicted RBP18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 LZTR1Q8N653 840 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 BCL7CQ8WUZ0 217 aaPredicted RBP18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CKAP2Q8WWK9 683 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 C1orf74Q96LT6 269 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CEP295NLQ96MC4 621 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SMC6Q96SB8 1091 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PPP1R12CQ9BZL4 782 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 OLA1Q9NTK5 396 aaKnown RBP18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 FNIP2Q9P278 1114 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 KLHL8Q9P2G9 620 aaPredicted RBP18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TBX21Q9UL17 535 aa18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ATXN2Q99700 1313 aaKnown RBP18.48■□□□□ 0.55
HLA-DQB1-201ENST00000374943 APOEP02649 317 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CNKSR3Q6P9H4 555 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 RNF19BQ6ZMZ0 732 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 UNC5AQ6ZN44 842 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PID1Q7Z2X4 250 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CCNJLQ8IV13 435 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PDCD7Q8N8D1 485 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 GSDMBQ8TAX9 411 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 FCRL2Q96LA5 508 aaPredicted RBP18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TSGA13Q96PP4 275 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 GBA3Q9H227 469 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ZNF180Q9UJW8 692 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PCDHA11Q9Y5I1 949 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 IQANK1A0A1B0GTG1 560 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ERI2A8K979 691 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 WASH4PA8MWX3 477 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 NT5C1B-RDH14C9J2C7 533 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 KCNK1O00180 336 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SUN1O94901 812 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 GRIA1P42261 906 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ITPRIPL1Q6GPH6 555 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ARHGAP12Q8IWW6 846 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 RNF168Q8IYW5 571 aaPredicted RBP18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ANKRD42Q8N9B4 389 aa18.47■□□□□ 0.55
HLA-DQB1-201ENST00000374943 STKLD1Q8NE28 680 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms