RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 LRRC38Q5VT99 294 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 FAM35AQ86V20 835 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 SNX31Q8N9S9 440 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 OR6P1Q8NGX9 317 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 OMDQ99983 421 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 PRDM5Q9NQX1 630 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-203ENST00000374429 C20orf96Q9NUD7 363 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-203ENST00000374429 DNAJB4Q9UDY4 337 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 ZBTB24O43167 697 aaPredicted RBP11.1□□□□□ -0.63
CXCL12-203ENST00000374429 MSX2P35548 267 aaPredicted RBP11.1□□□□□ -0.63
CXCL12-203ENST00000374429 COPS2P61201 443 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 NR1H3Q13133 447 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 CTBP1Q13363 440 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 KLHL38Q2WGJ6 581 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 EFHC1Q5JVL4 640 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 NLRP9Q7RTR0 991 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 CROCCP2Q86T23 111 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 IFNL1Q8IU54 200 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 EIF1ADQ8N9N8 165 aaKnown RBP11.1□□□□□ -0.63
CXCL12-203ENST00000374429 EZH1Q92800 747 aaPredicted RBP11.1□□□□□ -0.63
CXCL12-203ENST00000374429 SMOQ99835 787 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 ZCWPW1Q9H0M4 648 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 USP29Q9HBJ7 922 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 IARS2Q9NSE4 1012 aaKnown RBP11.1□□□□□ -0.63
CXCL12-203ENST00000374429 SMIM35A0A1B0GVV1 85 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 A8MX80 341 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 LTFP02788 710 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 MATKP42679 507 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 RAB27AP51159 221 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 ARFIP2P53365 341 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 CRYBB1P53674 252 aaPredicted RBP11.1□□□□□ -0.63
CXCL12-203ENST00000374429 EPHB1P54762 984 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 LRRC23Q53EV4 343 aaPredicted RBP11.1□□□□□ -0.63
CXCL12-203ENST00000374429 CFAP157Q5JU67 520 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 UBXN11Q5T124 520 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 SLC30A9Q6PML9 568 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 AGMOQ6ZNB7 445 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 LRRTM3Q86VH5 581 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 CXorf38Q8TB03 319 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 SH3TC2Q8TF17 1288 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 CCT6BQ92526 530 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 SCLYQ96I15 445 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 APBA2Q99767 749 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 DUSP16Q9BY84 665 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 MAF1Q9H063 256 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 CYP4F12Q9HCS2 524 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 LMCD1Q9NZU5 365 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 GNEQ9Y223 722 aaKnown RBP11.1□□□□□ -0.63
CXCL12-203ENST00000374429 DRG1Q9Y295 367 aaKnown RBP11.1□□□□□ -0.63
CXCL12-203ENST00000374429 H3BRJ5 948 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 PRKCGP05129 697 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 MGAT5Q09328 741 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 GEN1Q17RS7 908 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 FAM171A1Q5VUB5 890 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 ZNF280DQ6N043 979 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 RPS27LQ71UM5 84 aaKnown RBP11.1□□□□□ -0.63
CXCL12-203ENST00000374429 SAPCD2Q86UD0 394 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 CDKL3Q8IVW4 592 aaPredicted RBP11.1□□□□□ -0.63
CXCL12-203ENST00000374429 PPP4R1Q8TF05 950 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 MARK4Q96L34 752 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.1□□□□□ -0.63
CXCL12-203ENST00000374429 RNF186Q9NXI6 227 aa11.1□□□□□ -0.63
CXCL12-203ENST00000374429 DCAF8L1A6NGE4 600 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 NFKB1P19838 968 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 CCR10P46092 362 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 CAND1Q86VP6 1230 aaKnown RBP11.09□□□□□ -0.63
CXCL12-203ENST00000374429 RNF148Q8N7C7 305 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 POPDC2Q9HBU9 364 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 ENTPD5O75356 428 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 TGM2P21980 687 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 SLC45A4Q5BKX6 768 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 NCBP2-AS2Q69YL0 99 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 TMEM110Q86TL2 294 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 LONP2Q86WA8 852 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 ZNF567Q8N184 647 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 CD99L2Q8TCZ2 262 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 MAGEB18Q96M61 343 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 FSD1LQ9BXM9 530 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 TRIM55Q9BYV6 548 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 GPBP1L1Q9HC44 474 aaPredicted RBP11.09□□□□□ -0.63
CXCL12-203ENST00000374429 NDFIP2Q9NV92 336 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 ACTL7AQ9Y615 435 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 USP34Q70CQ2 3546 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 CFLARO15519 480 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 LRIG2O94898 1065 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 SNRPAP09012 282 aaKnown RBP11.09□□□□□ -0.63
CXCL12-203ENST00000374429 PCK1P35558 622 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 AQP5P55064 265 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 ACCSLQ4AC99 568 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 LGSNQ5TDP6 509 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 PPP1R2P3Q6NXS1 205 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 STRA8Q7Z7C7 330 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 CLPTM1LQ96KA5 538 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 MTG1Q9BT17 334 aaPredicted RBP11.09□□□□□ -0.63
CXCL12-203ENST00000374429 SLC4A5Q9BY07 1137 aa11.09□□□□□ -0.63
CXCL12-203ENST00000374429 TPP1O14773 563 aa11.08□□□□□ -0.64
CXCL12-203ENST00000374429 VAPBO95292 243 aa11.08□□□□□ -0.64
CXCL12-203ENST00000374429 SERPINB4P48594 390 aa11.08□□□□□ -0.64
CXCL12-203ENST00000374429 TSPY1Q01534 308 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms