RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 RNF111Q6ZNA4 994 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 DEFB106AQ8N104 65 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 FCRL3Q96P31 734 aaPredicted RBP13.08□□□□□ -0.32
CTPS1-202ENST00000372621 GORASP1Q9BQQ3 440 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 CEP41Q9BYV8 373 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 TUT1Q9H6E5 874 aaKnown RBP13.08□□□□□ -0.32
CTPS1-202ENST00000372621 S100A14Q9HCY8 104 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 TMPRSS4Q9NRS4 437 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 HES2Q9Y543 173 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 SPTLC1O15269 473 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 USP1O94782 785 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 ERVK-10P10266 1014 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 GP5P40197 560 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 ERFP50548 548 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 CDC16Q13042 620 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 PAFAH1B3Q15102 231 aaKnown RBP13.08□□□□□ -0.32
CTPS1-202ENST00000372621 GRIK4Q16099 956 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 EFHC1Q5JVL4 640 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 GLRA4Q5JXX5 417 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 ZNF618Q5T7W0 954 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 PAXIP1Q6ZW49 1069 aaPredicted RBP13.08□□□□□ -0.32
CTPS1-202ENST00000372621 RASSF3Q86WH2 238 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 POU5F2Q8N7G0 328 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 SHCBP1Q8NEM2 672 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 SLC2A14Q8TDB8 520 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 ACTRT2Q8TDY3 377 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 RNF139Q8WU17 664 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 CERS2Q96G23 380 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 CPNE1Q99829 537 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 KATNBL1Q9H079 304 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 STK10O94804 968 aaKnown RBP13.07□□□□□ -0.32
CTPS1-202ENST00000372621 POLBP06746 335 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 GNL1P36915 607 aaPredicted RBP13.07□□□□□ -0.32
CTPS1-202ENST00000372621 GMPRP36959 345 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 SULT1E1P49888 294 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 PITX1P78337 314 aaPredicted RBP13.07□□□□□ -0.32
CTPS1-202ENST00000372621 HNRNPDQ14103 355 aaKnown RBP13.07□□□□□ -0.32
CTPS1-202ENST00000372621 DPYSQ14117 519 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 KIZQ2M2Z5 673 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 ZNF792Q3KQV3 632 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 SPANXN3Q5MJ09 141 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 GRTP1Q5TC63 336 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 PPP4R1Q8TF05 950 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 TTC1Q99614 292 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 ZNF358Q9NW07 568 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 PCNTO95613 3336 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 EME2A4GXA9 379 aaPredicted RBP13.07□□□□□ -0.32
CTPS1-202ENST00000372621 RALBP11234 206 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 TKTP29401 623 aaKnown RBP13.07□□□□□ -0.32
CTPS1-202ENST00000372621 TYK2P29597 1187 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 MLH1P40692 756 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 PDK1Q15118 436 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 CCDC153Q494R4 210 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 FBXO47Q5MNV8 452 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 NDRG1Q92597 394 aaKnown RBP13.07□□□□□ -0.32
CTPS1-202ENST00000372621 TSC22D3Q99576 134 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 PRDM12Q9H4Q4 367 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 VTA1Q9NP79 307 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 SNX15Q9NRS6 342 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 RNF19AQ9NV58 838 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 ZDHHC7Q9NXF8 308 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 GDAP2Q9NXN4 497 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 PLXNB2O15031 1838 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 SCN4AP35499 1836 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 ZNF236Q9UL36 1845 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 XPO1O14980 1071 aaKnown RBP13.07□□□□□ -0.32
CTPS1-202ENST00000372621 SMIM24O75264 130 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 DAB1O75553 588 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 DEUP1Q05D60 604 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 CCNIQ14094 377 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 VWA5B1Q5TIE3 1220 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 PDPK2PQ6A1A2 396 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 CES3Q6UWW8 571 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 RAPH1Q70E73 1250 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 TP53INP2Q8IXH6 220 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 PGBD4Q96DM1 585 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 NPY6RQ99463 290 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 RBBP8Q99708 897 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 PIDD1Q9HB75 910 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 ADAM28Q9UKQ2 775 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 RPS6KL1Q9Y6S9 549 aa13.07□□□□□ -0.32
CTPS1-202ENST00000372621 KPNA7A9QM74 516 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 DCLK1O15075 740 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 CAPN15O75808 1086 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 SORBS2O94875 1100 aaKnown RBP13.06□□□□□ -0.32
CTPS1-202ENST00000372621 LYNP07948 512 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 CPA3P15088 417 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 ADCYAP1R1P41586 468 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 CDK7P50613 346 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 PPIL2Q13356 520 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 OLIG2Q13516 323 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 FRG1Q14331 258 aaKnown RBP13.06□□□□□ -0.32
CTPS1-202ENST00000372621 MOB2Q70IA6 237 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 CMC1Q7Z7K0 106 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 CLEC14AQ86T13 490 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 RSPH3Q86UC2 560 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 ANKRD13AQ8IZ07 590 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 PLD6Q8N2A8 252 aaKnown RBP13.06□□□□□ -0.32
CTPS1-202ENST00000372621 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
CTPS1-202ENST00000372621 PGLYRP2Q96PD5 576 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms