RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ADGRD1Q6QNK2 874 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 RSPO2Q6UXX9 243 aaPredicted RBP25.69■■□□□ 1.7
CTSA-203ENST00000372459 RNF19BQ6ZMZ0 732 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.69■■□□□ 1.75e-11■■■■□ 24.7
CTSA-203ENST00000372459 ZNF473Q8WTR7 871 aaKnown RBP25.69■■□□□ 1.7
CTSA-203ENST00000372459 MRRFQ96E11 262 aaKnown RBP25.69■■□□□ 1.7
CTSA-203ENST00000372459 DHRS4Q9BTZ2 278 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 IGSF9Q9P2J2 1179 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 ZC3H7BQ9UGR2 993 aaKnown RBP25.69■■□□□ 1.7
CTSA-203ENST00000372459 TCRBV9S1A1TA0A576 114 aa25.68■■□□□ 1.7
CTSA-203ENST00000372459 FAM92AA1XBS5 289 aa25.68■■□□□ 1.7
CTSA-203ENST00000372459 UPP2O95045 317 aa25.68■■□□□ 1.7
CTSA-203ENST00000372459 GARSP41250 739 aaKnown RBP25.68■■□□□ 1.7
CTSA-203ENST00000372459 MSH2P43246 934 aa25.68■■□□□ 1.7
CTSA-203ENST00000372459 ALDH7A1P49419 539 aaKnown RBP25.68■■□□□ 1.7
CTSA-203ENST00000372459 CNKSR3Q6P9H4 555 aa25.68■■□□□ 1.7
CTSA-203ENST00000372459 PID1Q7Z2X4 250 aa25.68■■□□□ 1.7
CTSA-203ENST00000372459 BCL7CQ8WUZ0 217 aaPredicted RBP25.68■■□□□ 1.7
CTSA-203ENST00000372459 CFAP36Q96G28 342 aa25.68■■□□□ 1.7
CTSA-203ENST00000372459 SPATA17Q96L03 361 aa25.68■■□□□ 1.7
CTSA-203ENST00000372459 SEPT5Q99719 369 aaPredicted RBP25.68■■□□□ 1.7
CTSA-203ENST00000372459 CEP41Q9BYV8 373 aa25.68■■□□□ 1.7
CTSA-203ENST00000372459 KLHL8Q9P2G9 620 aaPredicted RBP25.68■■□□□ 1.7
CTSA-203ENST00000372459 TLR6Q9Y2C9 796 aa25.68■■□□□ 1.7
CTSA-203ENST00000372459 SLC27A5Q9Y2P5 690 aa25.68■■□□□ 1.7
CTSA-203ENST00000372459 GSTA2P09210 222 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 MLNP12872 115 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 PTPN3P26045 913 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 HOXC13P31276 330 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 PKN2Q16513 984 aaKnown RBP25.67■■□□□ 1.7
CTSA-203ENST00000372459 TAS1R1Q7RTX1 841 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 GPR152Q8TDT2 470 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 FBXO32Q969P5 355 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 FCRL2Q96LA5 508 aaPredicted RBP25.67■■□□□ 1.7
CTSA-203ENST00000372459 PRMT1Q99873 361 aaKnown RBP25.67■■□□□ 1.7
CTSA-203ENST00000372459 CCDC134Q9H6E4 229 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 CATSPERBQ9H7T0 1116 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 NEU3Q9UQ49 428 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 KCNU1A8MYU2 1149 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 KCNK1O00180 336 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 FGF10O15520 208 aaPredicted RBP25.67■■□□□ 1.7
CTSA-203ENST00000372459 HAPLN1P10915 354 aaPredicted RBP25.67■■□□□ 1.7
CTSA-203ENST00000372459 PSMB4P28070 264 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 TBC1D31Q96DN5 1066 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 COMMD8Q9NX08 183 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 TBX21Q9UL17 535 aa25.67■■□□□ 1.7
CTSA-203ENST00000372459 SOAT2O75908 522 aa25.66■■□□□ 1.7
CTSA-203ENST00000372459 SLC2A3P11169 496 aa25.66■■□□□ 1.7
CTSA-203ENST00000372459 PSEN1P49768 467 aa25.66■■□□□ 1.7
CTSA-203ENST00000372459 COG7P83436 770 aa25.66■■□□□ 1.7
CTSA-203ENST00000372459 MANEALQ5VSG8 457 aa25.66■■□□□ 1.7
CTSA-203ENST00000372459 YTHDF3Q7Z739 585 aaKnown RBP25.66■■□□□ 1.7
CTSA-203ENST00000372459 PDCD7Q8N8D1 485 aaKnown RBP25.66■■□□□ 1.7
CTSA-203ENST00000372459 CHMP6Q96FZ7 201 aa25.66■■□□□ 1.7
CTSA-203ENST00000372459 SIGLEC10Q96LC7 697 aa25.66■■□□□ 1.7
CTSA-203ENST00000372459 CLIC5Q9NZA1 410 aa25.66■■□□□ 1.7
CTSA-203ENST00000372459 ATP11BQ9Y2G3 1177 aa25.66■■□□□ 1.7
CTSA-203ENST00000372459 F5H423 210 aaPredicted RBP25.65■■□□□ 1.7
CTSA-203ENST00000372459 TRDMT1O14717 391 aaKnown RBP25.65■■□□□ 1.7
CTSA-203ENST00000372459 LRRC8BQ6P9F7 803 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 ANKRD42Q8N9B4 389 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 DCAKDQ8WVC6 231 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 DYDC1Q8WWB3 177 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 VAT1Q99536 393 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 EBNA1BP2Q99848 306 aaKnown RBP25.65■■□□□ 1.7
CTSA-203ENST00000372459 TRABDQ9H4I3 376 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 TLR8Q9NR97 1041 aaKnown RBP25.65■■□□□ 1.7
CTSA-203ENST00000372459 NKIRAS1Q9NYS0 192 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 VNN2O95498 520 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 MOCS2O96007 188 aaPredicted RBP25.65■■□□□ 1.7
CTSA-203ENST00000372459 GRIA1P42261 906 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 RPL10AP62906 217 aaKnown RBP25.65■■□□□ 1.7
CTSA-203ENST00000372459 NRG1Q02297 640 aaPredicted RBP25.65■■□□□ 1.7
CTSA-203ENST00000372459 ZNF33AQ06730 810 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 PRSS55Q6UWB4 352 aaPredicted RBP25.65■■□□□ 1.7
CTSA-203ENST00000372459 LZTR1Q8N653 840 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 MGARPQ8TDB4 240 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 SLC39A13Q96H72 371 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 SMC6Q96SB8 1091 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 CRISPLD1Q9H336 500 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 OLA1Q9NTK5 396 aaKnown RBP25.65■■□□□ 1.7
CTSA-203ENST00000372459 TMEM39AQ9NV64 488 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 TRHDEQ9UKU6 1024 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 MAD1L1Q9Y6D9 718 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 CDY1Q9Y6F8 540 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 IKBKGQ9Y6K9 419 aa25.65■■□□□ 1.7
CTSA-203ENST00000372459 KIAA0754O94854 1291 aa25.64■■□□□ 1.7
CTSA-203ENST00000372459 DUSP4Q13115 394 aa25.64■■□□□ 1.7
CTSA-203ENST00000372459 USP41Q3LFD5 358 aa25.64■■□□□ 1.7
CTSA-203ENST00000372459 KBTBD12Q3ZCT8 623 aa25.64■■□□□ 1.7
CTSA-203ENST00000372459 FBXO22Q8NEZ5 403 aa25.64■■□□□ 1.7
CTSA-203ENST00000372459 CELF6Q96J87 481 aaKnown RBP25.64■■□□□ 1.7
CTSA-203ENST00000372459 C1orf74Q96LT6 269 aa25.64■■□□□ 1.7
CTSA-203ENST00000372459 TTLL3Q9Y4R7 772 aa25.64■■□□□ 1.7
CTSA-203ENST00000372459 HS3ST4Q9Y661 456 aa25.64■■□□□ 1.7
CTSA-203ENST00000372459 TBX4P57082 545 aa25.64■■□□□ 1.69
CTSA-203ENST00000372459 TAF10Q12962 218 aa25.64■■□□□ 1.69
CTSA-203ENST00000372459 PACS2Q86VP3 889 aa25.64■■□□□ 1.69
CTSA-203ENST00000372459 DIS3LQ8TF46 1054 aaKnown RBP25.64■■□□□ 1.69
CTSA-203ENST00000372459 DEPDC1BQ8WUY9 529 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms