RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 TRIM11Q96F44 468 aa7.26□□□□□ -1.25
USP1-202ENST00000371146 FCRL2Q96LA5 508 aaPredicted RBP7.26□□□□□ -1.25
USP1-202ENST00000371146 ALS2CR12Q96Q35 445 aa7.26□□□□□ -1.25
USP1-202ENST00000371146 OSBPL6Q9BZF3 934 aa7.26□□□□□ -1.25
USP1-202ENST00000371146 TMEM165Q9HC07 324 aa7.26□□□□□ -1.25
USP1-202ENST00000371146 CHST7Q9NS84 486 aa7.26□□□□□ -1.25
USP1-202ENST00000371146 IPO11Q9UI26 975 aaKnown RBP7.26□□□□□ -1.25
USP1-202ENST00000371146 SIT1Q9Y3P8 196 aa7.26□□□□□ -1.25
USP1-202ENST00000371146 DCLK1O15075 740 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 PAPSS1O43252 624 aaPredicted RBP7.25□□□□□ -1.25
USP1-202ENST00000371146 DCXO43602 365 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 CAVIN2O95810 425 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 C1RP00736 705 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 CCDC159P0C7I6 412 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 POLR2EP19388 210 aaKnown RBP7.25□□□□□ -1.25
USP1-202ENST00000371146 SNRPFP62306 86 aaKnown RBP7.25□□□□□ -1.25
USP1-202ENST00000371146 SEPT6Q14141 434 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 PACS1Q6VY07 963 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 NYAP1Q6ZVC0 841 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 MARK2Q7KZI7 788 aaKnown RBP7.25□□□□□ -1.25
USP1-202ENST00000371146 GPR149Q86SP6 731 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 UNC93AQ86WB7 457 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 SLC44A3Q8N4M1 653 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 FAM76AQ8TAV0 307 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 EPS8L1Q8TE68 723 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 DQX1Q8TE96 717 aaKnown RBP7.25□□□□□ -1.25
USP1-202ENST00000371146 UCMAQ8WVF2 138 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 FAM136AQ96C01 138 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 OMDQ99983 421 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 HERC2P3Q9BVR0 1158 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 PHACTR1Q9C0D0 580 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 ARHGEF3Q9NR81 526 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 DZANK1Q9NVP4 752 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 NCDNQ9UBB6 729 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP1-202ENST00000371146 TTC7AQ9ULT0 858 aaPredicted RBP7.25□□□□□ -1.25
USP1-202ENST00000371146 MYOFQ9NZM1 2061 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 ANO9A1A5B4 782 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 OAZ2O95190 189 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 AMPD1P23109 780 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 CSE1LP55060 971 aaKnown RBP7.25□□□□□ -1.25
USP1-202ENST00000371146 TAC4Q86UU9 113 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 ALLCQ8N6M5 410 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 ATP6V0D2Q8N8Y2 350 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 SMYD1Q8NB12 490 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 ASIC4Q96FT7 647 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 PLA2G2FQ9BZM2 168 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 TBC1D17Q9HA65 648 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 POPDC2Q9HBU9 364 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 SLC25A13Q9UJS0 675 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 MYO6Q9UM54 1294 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 ZNF148Q9UQR1 794 aa7.25□□□□□ -1.25
USP1-202ENST00000371146 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 ZNF840PA6NDX5 716 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 AP5Z1O43299 807 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 KRT86O43790 486 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 NDUFS2O75306 463 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 PMPCBO75439 489 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 SERPING1P05155 500 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 GPD1P21695 349 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 DGKGP49619 791 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 STK19P49842 368 aaPredicted RBP7.24□□□□□ -1.25
USP1-202ENST00000371146 CDR2Q01850 454 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 ZNF235Q14590 738 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 ZBTB6Q15916 424 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 ITPRIPL2Q3MIP1 535 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 ENOSF1Q7L5Y1 443 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 ARHGAP22Q7Z5H3 698 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 TTC7BQ86TV6 843 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 MMAAQ8IVH4 418 aaKnown RBP7.24□□□□□ -1.25
USP1-202ENST00000371146 TMEFF1Q8IYR6 380 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 SLC25A41Q8N5S1 370 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 TSTD1Q8NFU3 115 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 OR14C36Q8NHC7 312 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 RPLP0P6Q8NHW5 317 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 SLC35B4Q969S0 331 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 WBP2Q969T9 261 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 NECTIN4Q96NY8 510 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 PCDHB18PQ96TA0 734 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 RTP3Q9BQQ7 232 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 ZDHHC6Q9H6R6 413 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 MRPL47Q9HD33 250 aaKnown RBP7.24□□□□□ -1.25
USP1-202ENST00000371146 WDR6Q9NNW5 1121 aaKnown RBP7.24□□□□□ -1.25
USP1-202ENST00000371146 ARFGAP3Q9NP61 516 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 ABCC13Q9NSE7 274 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 OR12D3Q9UGF7 316 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 SLCO3A1Q9UIG8 710 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 FBXW11Q9UKB1 542 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 DERAQ9Y315 318 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 ACTL7AQ9Y615 435 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 TRIP11Q15643 1979 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 ATXN2Q99700 1313 aaKnown RBP7.24□□□□□ -1.25
USP1-202ENST00000371146 EEF2KO00418 725 aaKnown RBP7.24□□□□□ -1.25
USP1-202ENST00000371146 NCAM2O15394 837 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 SART1O43290 800 aaKnown RBP7.24□□□□□ -1.25
USP1-202ENST00000371146 SNAP91O60641 907 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 APODP05090 189 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 MSL3P1P0C860 447 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 MMRN1Q13201 1228 aa7.24□□□□□ -1.25
USP1-202ENST00000371146 RUNX3Q13761 415 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms