RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 NETO2Q8NC67 525 aa13.19□□□□□ -0.3
GPC3-201ENST00000370818 OR10T2Q8NGX3 314 aa13.19□□□□□ -0.3
GPC3-201ENST00000370818 GDAP1Q8TB36 358 aa13.19□□□□□ -0.3
GPC3-201ENST00000370818 AZIN2Q96A70 460 aa13.19□□□□□ -0.3
GPC3-201ENST00000370818 PGBD4Q96DM1 585 aa13.19□□□□□ -0.3
GPC3-201ENST00000370818 TMEM237Q96Q45 408 aa13.19□□□□□ -0.3
GPC3-201ENST00000370818 TMEM209Q96SK2 561 aa13.19□□□□□ -0.3
GPC3-201ENST00000370818 PAFAH2Q99487 392 aa13.19□□□□□ -0.3
GPC3-201ENST00000370818 LGMNQ99538 433 aa13.19□□□□□ -0.3
GPC3-201ENST00000370818 TRABDQ9H4I3 376 aa13.19□□□□□ -0.3
GPC3-201ENST00000370818 A0A1W2PPM1 405 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 FAM47DPA6NHR8 397 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 FAM72CH0Y354 149 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 CAPN9O14815 690 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 NVLO15381 856 aaKnown RBP13.18□□□□□ -0.3
GPC3-201ENST00000370818 SPAG7O75391 227 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 C1QAP02745 245 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 NCAM1P13591 858 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 ADRA1BP35368 520 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 WDR4P57081 412 aaKnown RBP13.18□□□□□ -0.3
GPC3-201ENST00000370818 DPYSQ14117 519 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 INTS6LQ5JSJ4 861 aaKnown RBP13.18□□□□□ -0.3
GPC3-201ENST00000370818 WASHC2DQ5SRD0 308 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 FAM72AQ5TYM5 149 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 FAM72DQ6L9T8 149 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 ZNF534Q76KX8 674 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 RNF180Q86T96 592 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 RTN4RL1Q86UN2 441 aaPredicted RBP13.18□□□□□ -0.3
GPC3-201ENST00000370818 LRRTM3Q86VH5 581 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 FAM72BQ86X60 149 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 CCNJLQ8IV13 435 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 SMC1BQ8NDV3 1235 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 DENND1AQ8TEH3 1009 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 DCAKDQ8WVC6 231 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 RSPH1Q8WYR4 309 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 PLAC1Q9HBJ0 212 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 NMRK1Q9NWW6 199 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 ATXN10Q9UBB4 475 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 LRCH1Q9Y2L9 728 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 B4GALT3O60512 393 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 ENTPD5O75356 428 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 ATP5HO75947 161 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 CABYRO75952 493 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 LTFP02788 710 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 CKBP12277 381 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 BDNFP23560 247 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 YY1P25490 414 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 TPP2P29144 1249 aaPredicted RBP13.18□□□□□ -0.3
GPC3-201ENST00000370818 MAGEA3P43357 314 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 SEMA3BQ13214 749 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 MTA1Q13330 715 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 MBTPS1Q14703 1052 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 KLHL38Q2WGJ6 581 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 HEATR6Q6AI08 1181 aaKnown RBP13.18□□□□□ -0.3
GPC3-201ENST00000370818 ARHGEF18Q6ZSZ5 1173 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 C4orf33Q8N1A6 199 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 VPS52Q8N1B4 723 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 SH3TC2Q8TF17 1288 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 MZB1Q8WU39 189 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 TFB1MQ8WVM0 346 aaKnown RBP13.18□□□□□ -0.3
GPC3-201ENST00000370818 HTR3CQ8WXA8 447 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 PTPRN2Q92932 1015 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 NTAN1Q96AB6 310 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 PGAP3Q96FM1 320 aaPredicted RBP13.18□□□□□ -0.3
GPC3-201ENST00000370818 SLC9A7Q96T83 725 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 FRMD8Q9BZ67 464 aaPredicted RBP13.18□□□□□ -0.3
GPC3-201ENST00000370818 TRPV6Q9H1D0 765 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 MYLK2Q9H1R3 596 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 NKIRAS1Q9NYS0 192 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 SENP1Q9P0U3 644 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 SQORQ9Y6N5 450 aa13.18□□□□□ -0.3
GPC3-201ENST00000370818 H3BRJ5 948 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 INPPL1O15357 1258 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 PRPF4O43172 522 aaKnown RBP eCLIP13.17□□□□□ -0.39e-8■■□□□ 12.7
GPC3-201ENST00000370818 C4orf22Q6V702 233 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 RFX8Q6ZV50 586 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 TP53INP2Q8IXH6 220 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 MCUQ8NE86 351 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 CD99L2Q8TCZ2 262 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 TBC1D10AQ9BXI6 508 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 MMADHCQ9H3L0 296 aaPredicted RBP13.17□□□□□ -0.3
GPC3-201ENST00000370818 DENND2DQ9H6A0 471 aaPredicted RBP13.17□□□□□ -0.3
GPC3-201ENST00000370818 PREBQ9HCU5 417 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 HACD1B0YJ81 288 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 DCLK1O15075 740 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 TYROBPO43914 113 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 SKIP12755 728 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 SCAPQ12770 1279 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 RCN2Q14257 317 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 PRKD1Q15139 912 aaPredicted RBP13.17□□□□□ -0.3
GPC3-201ENST00000370818 KBTBD12Q3ZCT8 623 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 PM20D1Q6GTS8 502 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 METTL23Q86XA0 190 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 EDEM1Q92611 657 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 INPP5DQ92835 1189 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 GATA6Q92908 595 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 SLC7A6OSQ96CW6 309 aaPredicted RBP13.17□□□□□ -0.3
GPC3-201ENST00000370818 CYTH2Q99418 400 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 FAM192AQ9GZU8 254 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms