RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 SLCO2A1Q92959 643 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 PABPC5Q96DU9 382 aaKnown RBP12.68□□□□□ -0.38
TUBE1-202ENST00000368662 CLDND1Q9NY35 253 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 GDE1Q9NZC3 331 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 CFAP97Q9P2B7 532 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 DOCK6Q96HP0 2047 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 TYW5A2RUC4 315 aaKnown RBP12.68□□□□□ -0.38
TUBE1-202ENST00000368662 CTIFO43310 598 aaKnown RBP12.68□□□□□ -0.38
TUBE1-202ENST00000368662 GREM1O60565 184 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 GAS8O95995 478 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 ITGAVP06756 1048 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 PECAM1P16284 738 aaPredicted RBP12.68□□□□□ -0.38
TUBE1-202ENST00000368662 MX2P20592 715 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 ZXDBP98169 803 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 DR1Q01658 176 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 ADGRE1Q14246 886 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 C1orf228Q6PIY5 440 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 C14orf80Q86SX3 495 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 RTL3Q8N8U3 475 aaKnown RBP12.68□□□□□ -0.38
TUBE1-202ENST00000368662 ITFG1Q8TB96 612 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 SH3RF2Q8TEC5 729 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 RIPOR3Q96MK2 946 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 FERMT1Q9BQL6 677 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 BRD8Q9H0E9 1235 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 ETNK2Q9NVF9 386 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 TMEM248Q9NWD8 314 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 DTLQ9NZJ0 730 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 CLEC1BQ9P126 229 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 SAE1Q9UBE0 346 aaPredicted RBP12.68□□□□□ -0.38
TUBE1-202ENST00000368662 AMACRQ9UHK6 382 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 DNPEPQ9ULA0 475 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 ZNF148Q9UQR1 794 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 SZT2Q5T011 3432 aa12.68□□□□□ -0.38
TUBE1-202ENST00000368662 HACD1B0YJ81 288 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 PPP1R12AO14974 1030 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 ECEL1O95672 775 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 RBP3P10745 1247 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 EIF3EP60228 445 aaKnown RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 GBE1Q04446 702 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 SNX1Q13596 522 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 PDK1Q15118 436 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 OASLQ15646 514 aaKnown RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 GPR153Q6NV75 609 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 SYDE1Q6ZW31 735 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 FAM217AQ8IXS0 508 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 LGI2Q8N0V4 545 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 CPXM2Q8N436 756 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 CELF5Q8N6W0 485 aaKnown RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 ING5Q8WYH8 240 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 USP13Q92995 863 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 CCDC114Q96M63 670 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 GOLGA6L7A0A1B0GV03 622 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 TARSL2A2RTX5 802 aaKnown RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 CFAP69A5D8W1 941 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 FAM187AA6NFU0 413 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 SOX1O00570 391 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 MFSD11O43934 449 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 SLC6A4P31645 630 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 STIP1P31948 543 aaKnown RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 MTHFRP42898 656 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 MAPKAPK2P49137 400 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 ARTNQ5T4W7 220 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 TTC27Q6P3X3 843 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 NPNTQ6UXI9 565 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 NLRP14Q86W24 1093 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 LRRC49Q8IUZ0 686 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 CDKL3Q8IVW4 592 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 ARID3BQ8IVW6 561 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 NPAS3Q8IXF0 933 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 GPR161Q8N6U8 529 aaKnown RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 ZSCAN18Q8TBC5 510 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-202ENST00000368662 RUBCNQ92622 972 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 IGSF8Q969P0 613 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 OLFM3Q96PB7 478 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 FAM118BQ9BPY3 351 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 LRRC1Q9BTT6 524 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 APOL5Q9BWW9 433 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 S1PR5Q9H228 398 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 MPP6Q9NZW5 540 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 TBC1D14Q9P2M4 693 aa12.67□□□□□ -0.38
TUBE1-202ENST00000368662 H7C0C1 242 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 RAD51CO43502 376 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 TBX10O75333 385 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 CLDN11O75508 207 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 TUBBP07437 444 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 ATP5OP48047 213 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 NDST2P52849 883 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 CDH4P55283 916 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 USP4Q13107 963 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 CBX2Q14781 532 aaPredicted RBP12.66□□□□□ -0.38
TUBE1-202ENST00000368662 ERCC6LQ2NKX8 1250 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 RFWD3Q6PCD5 774 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 EP400NLQ6ZTU2 488 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 CHST9Q7L1S5 443 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 GET4Q7L5D6 327 aaPredicted RBP12.66□□□□□ -0.38
TUBE1-202ENST00000368662 GSTA5Q7RTV2 222 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 UMODL1-AS1Q8N2C9 162 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 CCHCR1Q8TD31 782 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 FGF13Q92913 245 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 WBP2Q969T9 261 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms