RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ST3GAL5Q9UNP4 418 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 PIAS1O75925 651 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 TYMPP19971 482 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 CYP2A7P20853 494 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 S100A5P33763 92 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 PTENP60484 403 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 FBXO39Q8N4B4 442 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 RNF148Q8N7C7 305 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 NCKIPSDQ9NZQ3 722 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 OR12D3Q9UGF7 316 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 PGAM1P18669 254 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 SERPINB10P48595 397 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 TUFMP49411 452 aaKnown RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 MAP2K5Q13163 448 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 TEX9Q8N6V9 391 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 FNDC5Q8NAU1 212 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 LENG1Q96BZ8 264 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 ROGDIQ9GZN7 287 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 POMKQ9H5K3 350 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 NCAM2O15394 837 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 TBL1XO60907 577 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 PIRTP0C851 137 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 THRAP10827 490 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 HOXA10P31260 410 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 SARSP49591 514 aaKnown RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 C16orf46Q6P387 395 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 LRRC8BQ6P9F7 803 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 KIAA1324Q6UXG2 1013 aaKnown RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 BNC2Q6ZN30 1099 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 TRPC4APQ8TEL6 797 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 TPD52L3Q96J77 140 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 ZNF558Q96NG5 402 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 PARVBQ9HBI1 364 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 CD248Q9HCU0 757 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 KRT84Q9NSB2 600 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 TMEM131LA2VDJ0 1609 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 ASTN1O14525 1302 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 DNALI1O14645 258 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 ABL2P42684 1182 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 TCP10LQ8TDR4 215 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 KCTD14Q9BQ13 255 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 MIR1-1HGQ9H1L0 117 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 EFCAB1Q9HAE3 211 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 KCNMB3Q9NPA1 279 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 ABCC13Q9NSE7 274 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 UXTQ9UBK9 157 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 SEC22BO75396 215 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 CYP3A4P08684 503 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 PAEPP09466 180 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 ATP5C1P36542 298 aaKnown RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 PKN2Q16513 984 aaKnown RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 ARMC12Q5T9G4 340 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 WLSQ5T9L3 541 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 OLFML2BQ68BL8 750 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 MICU2Q8IYU8 434 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 OR52K1Q8NGK4 314 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 OMDQ99983 421 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 CDT1Q9H211 546 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 GOLGA2P5Q9HBQ8 144 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 RIC1Q4ADV7 1423 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 PLSCR1O15162 318 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 DYRK3O43781 588 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 AMPD2Q01433 879 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 PFKPQ01813 784 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 TCHHL1Q5QJ38 904 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 ZDHHC17Q8IUH5 632 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 NAT16Q8N8M0 369 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 OR5B17Q8NGF7 314 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 SUSD6Q92537 303 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-207ENST00000368226 MARK4Q96L34 752 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 DNAJC18Q9H819 358 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 NINJ2Q9NZG7 142 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 PCDHA3Q9Y5H8 950 aa13.16□□□□□ -0.3
PTPRK-207ENST00000368226 KIAA1210Q9ULL0 1709 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 A0A096LPK6 155 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 UBDO15205 165 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 BRCC3P46736 316 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 FKBP1AP62942 108 aaKnown RBP13.15□□□□□ -0.3
PTPRK-207ENST00000368226 FAAP100Q0VG06 881 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 MYBPC2Q14324 1141 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 KBTBD12Q3ZCT8 623 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 NOMO2Q5JPE7 1267 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 MYCBPAPQ8TBZ2 947 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 ANKZF1Q9H8Y5 726 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 CERS4Q9HA82 394 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 BLOC1S6Q9UL45 172 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 APOA1P02647 267 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 MAXP61244 160 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 XRCC4Q13426 336 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 RBM43Q6ZSC3 357 aaKnown RBP13.15□□□□□ -0.3
PTPRK-207ENST00000368226 ACO2Q99798 780 aaKnown RBP13.15□□□□□ -0.3
PTPRK-207ENST00000368226 FUCA2Q9BTY2 467 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 BBS2Q9BXC9 721 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 FUT8Q9BYC5 575 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 SAC3D1A6NKF1 404 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 UBXN8O00124 270 aa13.15□□□□□ -0.3
PTPRK-207ENST00000368226 OR56A5P0C7T3 313 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms