RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 USP17L7P0C7H9 530 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 VAV1P15498 845 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 DNAJB2P25686 324 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 CCNFP41002 786 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 PPIDQ08752 370 aaKnown RBP14.41□□□□□ -0.1
USF1-202ENST00000368020 BNIP1Q12981 228 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 TIFABQ6ZNK6 161 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 FAM47EQ6ZV65 393 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 ACMSDQ8TDX5 336 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 HDAC11Q96DB2 347 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 SUSD3Q96L08 255 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 PPP1R2P1Q96PQ5 205 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 LGMNQ99538 433 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 PRDM12Q9H4Q4 367 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 MANSC1Q9H8J5 431 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 SLC40A1Q9NP59 571 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 TXLNGQ9NUQ3 528 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 TMEM39AQ9NV64 488 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 MOCS1Q9NZB8 636 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 NLRC5Q86WI3 1866 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 SYNJ2BP-COX16A0A087WUM0 186 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 TRIM49D1C9J1S8 452 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 KIAA0355O15063 1070 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 UBOX5O94941 541 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 TGDSO95455 350 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 ERCC2P18074 760 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 ADRA1DP25100 572 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 BRMS1LQ5PSV4 323 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 COL13A1Q5TAT6 717 aaPredicted RBP14.4□□□□□ -0.1
USF1-202ENST00000368020 OVOS1Q6IE37 1185 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 CGB2Q6NT52 195 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 SH2D5Q6ZV89 423 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 HFE2Q6ZVN8 426 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 MARK2Q7KZI7 788 aaKnown RBP14.4□□□□□ -0.1
USF1-202ENST00000368020 AGGF1Q8N302 714 aaeCLIP14.4□□□□□ -0.1
USF1-202ENST00000368020 DEPDC1BQ8WUY9 529 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 RSPH1Q8WYR4 309 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 NDRG1Q92597 394 aaKnown RBP14.4□□□□□ -0.1
USF1-202ENST00000368020 LRRC37BQ96QE4 947 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 KCNK16Q96T55 309 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 ADAM2Q99965 735 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 FTHL17Q9BXU8 183 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 OSBPL2Q9H1P3 480 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 COX16Q9P0S2 106 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 TET1Q8NFU7 2136 aa14.4□□□□□ -0.1
USF1-202ENST00000368020 PSMD3O43242 534 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 HNRNPCL1O60812 293 aaKnown RBP14.39□□□□□ -0.11
USF1-202ENST00000368020 CXCL10P02778 98 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 POLBP06746 335 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 PYGBP11216 843 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 RFC2P35250 354 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 ETV4P43268 484 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 PITX1P78337 314 aaPredicted RBP14.39□□□□□ -0.11
USF1-202ENST00000368020 MTM1Q13496 603 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 FRG1Q14331 258 aaKnown RBP14.39□□□□□ -0.11
USF1-202ENST00000368020 GPNMBQ14956 572 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 SYCP2LQ5T4T6 812 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 STXBP5Q5T5C0 1151 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 PRPF39Q86UA1 669 aaKnown RBP14.39□□□□□ -0.11
USF1-202ENST00000368020 ECHDC2Q86YB7 292 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 SUGP1Q8IWZ8 645 aaKnown RBP14.39□□□□□ -0.11
USF1-202ENST00000368020 KLC4Q9NSK0 619 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 KLHL8Q9P2G9 620 aaPredicted RBP14.39□□□□□ -0.11
USF1-202ENST00000368020 GRID1Q9ULK0 1009 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 PCDHB8Q9UN66 801 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 TIMM13Q9Y5L4 95 aaPredicted RBP14.39□□□□□ -0.11
USF1-202ENST00000368020 TANC1Q9C0D5 1861 aa14.39□□□□□ -0.11
USF1-202ENST00000368020 NBNO60934 754 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 RASSF2P50749 326 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 WASHC5Q12768 1159 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 PLEKHG4Q58EX7 1191 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 FAM133BQ5BKY9 247 aaKnown RBP14.38□□□□□ -0.11
USF1-202ENST00000368020 SPANXN3Q5MJ09 141 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 BSPRYQ5W0U4 402 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 FBXW10Q5XX13 1052 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 ATG16L1Q676U5 607 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 CASC4Q6P4E1 433 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 GLB1LQ6UWU2 654 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 GPRIN1Q7Z2K8 1008 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 CCDC91Q7Z6B0 441 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 ZNF567Q8N184 647 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 RNF169Q8NCN4 708 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 ATP2A3Q93084 1043 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 SERAC1Q96JX3 654 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 SRPK1Q96SB4 655 aaKnown RBP14.38□□□□□ -0.11
USF1-202ENST00000368020 PKMYT1Q99640 499 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 RTP3Q9BQQ7 232 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 TRIM55Q9BYV6 548 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 ABCC13Q9NSE7 274 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 SEPT10Q9P0V9 454 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 KANSL3Q9P2N6 904 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 OR12D3Q9UGF7 316 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 MAGEB16A2A368 324 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 TMEM189-UBE2V1I3L0A0 370 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 GOLGA8RI6L899 631 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 C2CD2LO14523 706 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 FGF10O15520 208 aaPredicted RBP14.38□□□□□ -0.11
USF1-202ENST00000368020 MGEA5O60502 916 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 AP2A1O95782 977 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 TIMP1P01033 207 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms