RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 RGL1Q9NZL6 768 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 TRPS1Q9UHF7 1281 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 RCOR1Q9UKL0 485 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 SIK3Q9Y2K2 1263 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 SRPRBQ9Y5M8 271 aaKnown RBP8.5□□□□□ -1.05
YBX3-204ENST00000366290 CFAP20Q9Y6A4 193 aaKnown RBP8.5□□□□□ -1.05
YBX3-204ENST00000366290 ATG2AQ2TAZ0 1938 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 VWA3AA6NCI4 1184 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 H3BNC9 293 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 SPTLC2O15270 562 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 PPP6R2O75170 966 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 MED24O75448 989 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 RB1P06400 928 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 STAG3L1P0CL83 205 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 MUTP22033 750 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 CDC25AP30304 524 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 NPEPPSP55786 919 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 ADAM8P78325 824 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 CYP4A11Q02928 519 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 POU5F1BQ06416 359 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 CTTNQ14247 550 aaKnown RBP8.49□□□□□ -1.05
YBX3-204ENST00000366290 HLTFQ14527 1009 aaKnown RBP eCLIP8.49□□□□□ -1.05
YBX3-204ENST00000366290 PDIA5Q14554 519 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 GRM3Q14832 879 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 STK38Q15208 465 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 TMEM266Q2M3C6 531 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 GAGE13Q4V321 117 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 EPC2Q52LR7 807 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 NT5DC1Q5TFE4 455 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 PLA2G4FQ68DD2 849 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 BORAQ6PGQ7 559 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 USP49Q70CQ1 688 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 LILRA3Q8N6C8 439 aaPredicted RBP8.49□□□□□ -1.05
YBX3-204ENST00000366290 OR7D4Q8NG98 312 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 LRRC15Q8TF66 581 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 RSPH1Q8WYR4 309 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 CEP170P1Q96L14 293 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 RPL10LQ96L21 214 aaKnown RBP8.49□□□□□ -1.05
YBX3-204ENST00000366290 ADAM2Q99965 735 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 C17orf80Q9BSJ5 609 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 TUFT1Q9NNX1 390 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 TMEM161AQ9NX61 479 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 SUCLA2Q9P2R7 463 aaPredicted RBP8.49□□□□□ -1.05
YBX3-204ENST00000366290 GINS2Q9Y248 185 aa8.49□□□□□ -1.05
YBX3-204ENST00000366290 A0A0U1RQF3 1178 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 DENND3A2RUS2 1198 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 ASAP2O43150 1006 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 GASTP01350 101 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 MYBP10242 640 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 SFPQP23246 707 aaKnown RBP eCLIP8.48□□□□□ -1.05
YBX3-204ENST00000366290 RPA1P27694 616 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 BMPR1AP36894 532 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 RARRES1P49788 294 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 POLGP54098 1239 aaPredicted RBP8.48□□□□□ -1.05
YBX3-204ENST00000366290 PER3P56645 1201 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 DSC2Q02487 901 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 DUSP2Q05923 314 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 EMC2Q15006 297 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 SPECC1Q5M775 1068 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 HYIQ5T013 277 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 CATSPER3Q86XQ3 398 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 PQLC1Q8N2U9 271 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 ZBTB34Q8NCN2 500 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 PRPF31Q8WWY3 499 aaKnown RBP8.48□□□□□ -1.05
YBX3-204ENST00000366290 PSPC1Q8WXF1 523 aaKnown RBP8.48□□□□□ -1.05
YBX3-204ENST00000366290 CFHR4Q92496 578 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 P2RX5Q93086 422 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 SH2D3AQ9BRG2 576 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 NFKBIZQ9BYH8 718 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 GCOM2Q9BZD3 368 aaPredicted RBP8.48□□□□□ -1.05
YBX3-204ENST00000366290 INO80BQ9C086 356 aaPredicted RBP8.48□□□□□ -1.05
YBX3-204ENST00000366290 MANSC1Q9H8J5 431 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 XPNPEP1Q9NQW7 623 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.48□□□□□ -1.05
YBX3-204ENST00000366290 CFAP45Q9UL16 551 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 PCDHA7Q9UN72 937 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 PCDHB7Q9Y5E2 793 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 PCDHB1Q9Y5F3 818 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 ATP6V1DQ9Y5K8 247 aa8.48□□□□□ -1.05
YBX3-204ENST00000366290 A0A087WWV3 80 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 A0A087WZ62 844 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 KRTAP9-7A8MTY7 169 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 NRP1O14786 923 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 SGTAO43765 313 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 ZNF623O75123 536 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 ITGA10O75578 1167 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 CNOT4O95628 575 aaKnown RBP8.47□□□□□ -1.05
YBX3-204ENST00000366290 GYPEP15421 78 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 CRHR1P34998 444 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 ARL2P36404 184 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 LONP1P36776 959 aaKnown RBP8.47□□□□□ -1.05
YBX3-204ENST00000366290 PLA2G5P39877 138 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 LAMTOR4Q0VGL1 99 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 BTG3Q14201 252 aaPredicted RBP8.47□□□□□ -1.05
YBX3-204ENST00000366290 MXD4Q14582 209 aaPredicted RBP8.47□□□□□ -1.05
YBX3-204ENST00000366290 XKR9Q5GH70 373 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 SHC4Q6S5L8 630 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 CLEC17AQ6ZS10 378 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 SRGAP1Q7Z6B7 1085 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 RHPN2Q8IUC4 686 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms