RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SRSF1Q07955 248 aaKnown RBP eCLIP5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 PUM3Q15397 648 aaKnown RBP5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 SMTNL2Q2TAL5 461 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 ODF3L2Q3SX64 289 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 TBC1D3GQ6DHY5 549 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 TBC1D3CQ6IPX1 549 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 PGBD2Q6P3X8 592 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 KIAA1324Q6UXG2 1013 aaKnown RBP5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 TBC1D3Q8IZP1 549 aaPredicted RBP5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 SCAMP5Q8TAC9 235 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 ZFPM2Q8WW38 1151 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 SLC25A28Q96A46 364 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 SLC39A13Q96H72 371 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 SEMA4BQ9NPR2 832 aaPredicted RBP5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 THSD1Q9NS62 852 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 LZTS1Q9Y250 596 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 PCDHA10Q9Y5I2 948 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 A0A0G2JK05 382 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 CXorf65A6NEN9 183 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 SLC38A8A6NNN8 435 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 PROB1E7EW31 1015 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 TLX3O43711 291 aaPredicted RBP5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 NFATC1O95644 943 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 CRYABP02511 175 aaKnown RBP5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 TGM2P21980 687 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 HTR3AP46098 478 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 POLGP54098 1239 aaPredicted RBP5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 RBM6P78332 1123 aaKnown RBP5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 TNFAIP2Q03169 654 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 FHL1Q13642 323 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 UBE4AQ14139 1066 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 ARL13AQ5H913 290 aaPredicted RBP5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 KIAA1755Q5JYT7 1200 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 MANEAQ5SRI9 462 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 HMBOX1Q6NT76 420 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 PIM3Q86V86 326 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 SLC44A5Q8NCS7 719 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 ADAD1Q96M93 576 aaKnown RBP5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 CAMK1GQ96NX5 476 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 MPHOSPH6Q99547 160 aaKnown RBP5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 BRD8Q9H0E9 1235 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 SFXN1Q9H9B4 322 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 LRFN1Q9P244 771 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 AGO2Q9UKV8 859 aaKnown RBP5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 DAPP1Q9UN19 280 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 LAMP3Q9UQV4 416 aa5.09□□□□□ -1.59
RNU4-28P-201ENST00000364739 KIR2DS5A0A0G2JLQ3 304 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 IGLV5-39A0A0G2JS06 123 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 CCDC194A0A1B0GVG4 234 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 MYMKA6NI61 221 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 CD8B2A6NJW9 211 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 KIR2DS3K7RE56 304 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 ATG13O75143 517 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 TULP3O75386 442 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 SGPL1O95470 568 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 ALDOAP04075 364 aaKnown RBP5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 CYP3A4P08684 503 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 PNLIPRP1P54315 467 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 TLE3Q04726 772 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 ZACNQ401N2 412 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 TTLL5Q6EMB2 1281 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 LIN54Q6MZP7 749 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 MDGA2Q7Z553 956 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 TMEM199Q8N511 208 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 FAM47BQ8NA70 645 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 OR52N4Q8NGI2 321 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 POF1BQ8WVV4 589 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 WACQ9BTA9 647 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 KATNAL1Q9BW62 490 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 ZNF700Q9H0M5 742 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 MLXIPQ9HAP2 919 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 IL21RQ9HBE5 538 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 PLCB1Q9NQ66 1216 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 TAGLN3Q9UI15 199 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 PCDHA12Q9UN75 941 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 SLC8A2Q9UPR5 921 aa5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 COPG1Q9Y678 874 aaKnown RBP5.08□□□□□ -1.6
RNU4-28P-201ENST00000364739 CYP3A7-CYP3A51PA0A087WV96 503 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 DPPA5A6NC42 116 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 B4DGG1 531 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 F5H423 210 aaPredicted RBP5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 RHODO00212 210 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 PRPF4O43172 522 aaKnown RBP eCLIP5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 SKAP2O75563 359 aaPredicted RBP5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 EPN2O95208 641 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 IGFBP2P18065 325 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 SCP2P22307 547 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 CYP3A7P24462 503 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 GAD2Q05329 585 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 HDAC1Q13547 482 aaPredicted RBP5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 INPP5JQ15735 1006 aaPredicted RBP5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 PIK3CD-AS1Q5SR53 167 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 SULT6B1Q6IMI4 303 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 RRAGAQ7L523 313 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 NSMCE1Q8WV22 266 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 ATP2A3Q93084 1043 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 NLRP4Q96MN2 994 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 RTKNQ9BST9 563 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 FAM234AQ9H0X4 552 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms