RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 NFKBIZQ9BYH8 718 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 ZYG11BQ9C0D3 744 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 H2AFY2Q9P0M6 372 aaPredicted RBP13.76□□□□□ -0.21
LDB3-202ENST00000361373 GGT7Q9UJ14 662 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 NAALADL1Q9UQQ1 740 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 SKAP2O75563 359 aaPredicted RBP13.76□□□□□ -0.21
LDB3-202ENST00000361373 MLNP12872 115 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 LAG3P18627 525 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 HSPA13P48723 471 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 DMC1Q14565 340 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 WLSQ5T9L3 541 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 DAB2IPQ5VWQ8 1189 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 TSHZ1Q6ZSZ6 1077 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 NECAB2Q7Z6G3 386 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 HJURPQ8NCD3 748 aaPredicted RBP13.76□□□□□ -0.21
LDB3-202ENST00000361373 SPATA20Q8TB22 786 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 MDM1Q8TC05 714 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 LHX5Q9H2C1 402 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 SEMA4AQ9H3S1 761 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 HEY2Q9UBP5 337 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 MON2Q7Z3U7 1717 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 TGFB1I1O43294 461 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 SERPINE1P05121 402 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 SELPP16109 830 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 GPC1P35052 558 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 GLRBP48167 497 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 UGCGQ16739 394 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 SLC24A5Q71RS6 500 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 MON1AQ86VX9 555 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 KCNV2Q8TDN2 545 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 MYLPFQ96A32 169 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.76□□□□□ -0.21
LDB3-202ENST00000361373 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.76□□□□□ -0.21
LDB3-202ENST00000361373 TRIM13O60858 407 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 DAB1O75553 588 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 MGAT1P26572 445 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 NOMO3P69849 1222 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 HSDL1Q3SXM5 330 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 FNDC3BQ53EP0 1204 aaKnown RBP13.76□□□□□ -0.21
LDB3-202ENST00000361373 VSTM1Q6UX27 236 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
LDB3-202ENST00000361373 MAGEC3Q8TD91 643 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 REPS1Q96D71 796 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 DUSP16Q9BY84 665 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 RAB21Q9UL25 225 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 MRPS23Q9Y3D9 190 aaKnown RBP13.76□□□□□ -0.21
LDB3-202ENST00000361373 MYO1GB0I1T2 1018 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 PFDN1O60925 122 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 BMP10O95393 424 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 HALP42357 657 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 CCL23P55773 120 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 SKP1P63208 163 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 GJC2Q5T442 439 aaPredicted RBP13.75□□□□□ -0.21
LDB3-202ENST00000361373 ANKS6Q68DC2 871 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 ZNF470Q6ECI4 717 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 FAM183BPQ6ZVS7 135 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 GLIS3Q8NEA6 775 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 OR5B17Q8NGF7 314 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 KAT2BQ92831 832 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 OSGEPL1Q9H4B0 414 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 IGKV6D-41A0A0C4DH26 115 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 RBL1P28749 1068 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 MATKP42679 507 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 RPL21P46778 160 aaKnown RBP13.75□□□□□ -0.21
LDB3-202ENST00000361373 SERPINB10P48595 397 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 CCNG1P51959 295 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 CYLC2Q14093 348 aaPredicted RBP13.75□□□□□ -0.21
LDB3-202ENST00000361373 PCID2Q5JVF3 399 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 RFX8Q6ZV50 586 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 PALB2Q86YC2 1186 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 DNAJC16Q9Y2G8 782 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 MYO5BQ9ULV0 1848 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 A0A0G2JLL6 359 aaPredicted RBP13.75□□□□□ -0.21
LDB3-202ENST00000361373 QSOX1O00391 747 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 KPNA3O00505 521 aaPredicted RBP13.75□□□□□ -0.21
LDB3-202ENST00000361373 AP5Z1O43299 807 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 VAPBO95292 243 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 ASGR1P07306 291 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 ATP4AP20648 1035 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 PSMA4P25789 261 aaKnown RBP13.75□□□□□ -0.21
LDB3-202ENST00000361373 TKTP29401 623 aaKnown RBP13.75□□□□□ -0.21
LDB3-202ENST00000361373 CDC25CP30307 473 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 NUDT2P50583 147 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 PLCL1Q15111 1095 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 ZC3H12AQ5D1E8 599 aaKnown RBP13.75□□□□□ -0.21
LDB3-202ENST00000361373 PRRT2Q7Z6L0 340 aaPredicted RBP13.75□□□□□ -0.21
LDB3-202ENST00000361373 ABHD8Q96I13 439 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 RNF157Q96PX1 679 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 TSC22D3Q99576 134 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 VPS4BO75351 444 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 ERVK-10P10266 1014 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 TNFSF9P41273 254 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 FMO1Q01740 532 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 TRIP10Q15642 601 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 BBS12Q6ZW61 710 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 TMC3Q7Z5M5 1100 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 FBXO39Q8N4B4 442 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 HIPK3Q9H422 1215 aa13.75□□□□□ -0.21
LDB3-202ENST00000361373 TMCO1Q9UM00 188 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms