RNA–Protein interactions for RNA: ENST00000361283.2

CHAMP1-201, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAMP1, Length 3,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-201ENST00000361283 PDZD8Q8NEN9 1154 aa11.78□□□□□ -0.52
CHAMP1-201ENST00000361283 SEPT5Q99719 369 aaPredicted RBP11.78□□□□□ -0.52
CHAMP1-201ENST00000361283 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
CHAMP1-201ENST00000361283 EXOC1LA0A1B0GW35 172 aa11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 TRIM43BA6NCK2 446 aa11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 UPP2O95045 317 aa11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 HPDP32754 393 aaPredicted RBP11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 MLLT6P55198 1093 aaPredicted RBP11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 WDR5P61964 334 aaKnown RBP11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 GNGT1P63211 74 aa11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 IFI35P80217 286 aaPredicted RBP11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 ZNF534Q76KX8 674 aa11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 NECAB2Q7Z6G3 386 aa11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 DNAJC5GQ8N7S2 189 aa11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 FATE1Q969F0 183 aa11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 VPS37BQ9H9H4 285 aa11.77□□□□□ -0.52
CHAMP1-201ENST00000361283 MSI1O43347 362 aaKnown RBP11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 APRTP07741 180 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 ATF6P18850 670 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 SLCO1A2P46721 670 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 ATP1A2P50993 1020 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 ARPP19P56211 112 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 TBX4P57082 545 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 TAF10Q12962 218 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 DUSP4Q13115 394 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 BBS9Q3SYG4 887 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 GLIPR1L2Q4G1C9 344 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 DDX53Q86TM3 631 aaKnown RBP11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 KLHDC8BQ8IXV7 354 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 ZNF683Q8IZ20 524 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 COLGALT1Q8NBJ5 622 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 DONSONQ9NYP3 566 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 SLC27A5Q9Y2P5 690 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 HS3ST4Q9Y661 456 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 ERI2A8K979 691 aaKnown RBP11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 PTPN3P26045 913 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 GEMIN4P57678 1058 aaKnown RBP11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 EXOC3L1Q86VI1 746 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 PALM2Q8IXS6 379 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 ZNF567Q8N184 647 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 ATP6V0D2Q8N8Y2 350 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 CCNYQ8ND76 341 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 MAML1Q92585 1016 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 RETREG1Q9H6L5 497 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 PRDM10Q9NQV6 1147 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 SNX10Q9Y5X0 201 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 KIAA1671Q9BY89 1806 aa11.77□□□□□ -0.53
CHAMP1-201ENST00000361283 IGLV3-10A0A075B6K4 115 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 APOEP02649 317 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 CCNCP24863 283 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 ELK3P41970 407 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 KLHDC10Q6PID8 442 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 C3orf62Q6ZUJ4 267 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 CYS1Q717R9 158 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 ANKMY2Q8IV38 441 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 ZNF461Q8TAF7 563 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 BTN2A3PQ96KV6 586 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 CLSTN3Q9BQT9 956 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 SENP1Q9P0U3 644 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 SMIM23A6NLE4 172 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 E9PAM4 449 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 TRDMT1O14717 391 aaKnown RBP11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 SUN1O94901 812 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 ITGB8P26012 769 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 RASIP1Q5U651 963 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 LRRC8BQ6P9F7 803 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 LEKR1Q6ZMV7 388 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 CNPY4Q8N129 248 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 RTL3Q8N8U3 475 aaKnown RBP11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 ARHGEF2Q92974 986 aaKnown RBP11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 MYRFLQ96LU7 910 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 PRDM5Q9NQX1 630 aaPredicted RBP11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 HBS1LQ9Y450 684 aaKnown RBP11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 PTPRSQ13332 1948 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 ADAM12O43184 909 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 BANF1O75531 89 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 CSF2RAP15509 400 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 STX2P32856 288 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 LSP1P33241 339 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 OR1D2P34982 312 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 CREMQ03060 361 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 ITPRIPL1Q6GPH6 555 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 CCNJLQ8IV13 435 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 ARHGAP12Q8IWW6 846 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 AGGF1Q8N302 714 aaeCLIP11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 ZSCAN18Q8TBC5 510 aaPredicted RBP11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 TRMT2BQ96GJ1 504 aaKnown RBP11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 TMEM169Q96HH4 297 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 SPG21Q9NZD8 308 aa11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 PSMC3IPQ9P2W1 217 aaPredicted RBP11.76□□□□□ -0.53
CHAMP1-201ENST00000361283 CACNG3O60359 315 aa11.75□□□□□ -0.53
CHAMP1-201ENST00000361283 PPM1AP35813 382 aa11.75□□□□□ -0.53
CHAMP1-201ENST00000361283 TUBP50607 506 aa11.75□□□□□ -0.53
CHAMP1-201ENST00000361283 SLC18A1P54219 525 aa11.75□□□□□ -0.53
CHAMP1-201ENST00000361283 DEFB103AP81534 67 aa11.75□□□□□ -0.53
CHAMP1-201ENST00000361283 PIK3R6Q5UE93 754 aa11.75□□□□□ -0.53
CHAMP1-201ENST00000361283 KIAA1841Q6NSI8 718 aa11.75□□□□□ -0.53
CHAMP1-201ENST00000361283 NLRP14Q86W24 1093 aa11.75□□□□□ -0.53
CHAMP1-201ENST00000361283 TAB3Q8N5C8 712 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms