RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 OR10T2Q8NGX3 314 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 PTPRN2Q92932 1015 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 RNF186Q9NXI6 227 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 NUMBLQ9Y6R0 609 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 WDR91A4D1P6 747 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 PPP1R12AO14974 1030 aaPredicted RBP23.24■■□□□ 1.31
LDB1-201ENST00000361198 UGT1A9O60656 530 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 LPXNO60711 386 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 OPHN1O60890 802 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 PYGBP11216 843 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 TRIM71Q2Q1W2 868 aaKnown RBP23.24■■□□□ 1.31
LDB1-201ENST00000361198 TTC39BQ5VTQ0 682 aaPredicted RBP23.24■■□□□ 1.31
LDB1-201ENST00000361198 ZNF449Q6P9G9 518 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 MTDHQ86UE4 582 aaKnown RBP23.24■■□□□ 1.31
LDB1-201ENST00000361198 GSDMBQ8TAX9 411 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 PGBD4Q96DM1 585 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 ZNF570Q96NI8 536 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 RNPEPL1Q9HAU8 725 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 UGT1A7Q9HAW7 530 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 UGT1A10Q9HAW8 530 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 UGT1A8Q9HAW9 530 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 NUP205Q92621 2012 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 TRIM49D1C9J1S8 452 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 M0QZQ0 153 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 STK10O94804 968 aaKnown RBP23.23■■□□□ 1.31
LDB1-201ENST00000361198 TGDSO95455 350 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 GSTA2P09210 222 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 YY1P25490 414 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 PTPN4P29074 926 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 TPI1P60174 286 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 SARNPP82979 210 aaKnown RBP23.23■■□□□ 1.31
LDB1-201ENST00000361198 ZNF567Q8N184 647 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 RSPH1Q8WYR4 309 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 APOPT1Q96IL0 206 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 ANKRD27Q96NW4 1050 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 PKMYT1Q99640 499 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 ZNF180Q9UJW8 692 aa23.23■■□□□ 1.31
LDB1-201ENST00000361198 PEX11AO75192 247 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 IL1BP01584 269 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 CSH1P0DML2 217 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 CSH2P0DML3 217 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 PSMB4P28070 264 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 CDK16Q00536 496 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 PM20D1Q6GTS8 502 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 PCSK9Q8NBP7 692 aaKnown RBP23.22■■□□□ 1.31
LDB1-201ENST00000361198 RFWD2Q8NHY2 731 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 TRIM55Q9BYV6 548 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 BATF3Q9NR55 127 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 PIH1D1Q9NWS0 290 aaKnown RBP23.22■■□□□ 1.31
LDB1-201ENST00000361198 PCDHA11Q9Y5I1 949 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 CASP8AP2Q9UKL3 1982 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 KCNK1O00180 336 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 GNAZP19086 355 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 CALB2P22676 271 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 BSPRYQ5W0U4 402 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 LONP2Q86WA8 852 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 SH3TC2Q8TF17 1288 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 MIEF2Q96C03 454 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 FERMT1Q9BQL6 677 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 TSSK1BQ9BXA7 367 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 WDCPQ9H6R7 721 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 RRN3Q9NYV6 651 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 SNX10Q9Y5X0 201 aa23.22■■□□□ 1.31
LDB1-201ENST00000361198 GM2AP17900 193 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 CRADDP78560 199 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 ARL13BQ3SXY8 428 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 WASHC2DQ5SRD0 308 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 OVOS1Q6IE37 1185 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 ZNF598Q86UK7 904 aaKnown RBP23.21■■□□□ 1.31
LDB1-201ENST00000361198 NPWQ8N729 165 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 TKTL2Q9H0I9 626 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 DMAP1Q9NPF5 467 aaPredicted RBP23.21■■□□□ 1.31
LDB1-201ENST00000361198 WDR27A2RRH5 827 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 FAM159BA6NKW6 160 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 KRT37O76014 449 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 F9P00740 461 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 SNRPAP09012 282 aaKnown RBP23.21■■□□□ 1.31
LDB1-201ENST00000361198 MLNP12872 115 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 EPHB2P29323 1055 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 CXCR3P49682 368 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 FAM26DQ5JW98 314 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 LRRC8BQ6P9F7 803 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 NKX1-2Q9UD57 310 aaPredicted RBP23.21■■□□□ 1.31
LDB1-201ENST00000361198 DCTN4Q9UJW0 460 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 DSEQ9UL01 958 aa23.21■■□□□ 1.31
LDB1-201ENST00000361198 DNAJC6O75061 913 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 ALDH1A1P00352 501 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 HCAR3P49019 387 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 OVGP1Q12889 678 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 ENDOVQ8N8Q3 282 aaKnown RBP23.2■■□□□ 1.3
LDB1-201ENST00000361198 SCAMP5Q8TAC9 235 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 IRGQQ8WZA9 623 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 OXNAD1Q96HP4 312 aaPredicted RBP23.2■■□□□ 1.3
LDB1-201ENST00000361198 FAM111AQ96PZ2 611 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 KCNK13Q9HB14 408 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 ALG13Q9NP73 1137 aaKnown RBP23.2■■□□□ 1.3
LDB1-201ENST00000361198 EIF2B3Q9NR50 452 aaKnown RBP23.2■■□□□ 1.3
LDB1-201ENST00000361198 SESN2P58004 480 aaPredicted RBP23.2■■□□□ 1.3
LDB1-201ENST00000361198 BMPR2Q13873 1038 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 CASC4Q6P4E1 433 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms