RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 RNASEH2BQ5TBB1 312 aaKnown RBP7.61□□□□□ -1.19
CLCN3-202ENST00000360642 DCUN1D2Q6PH85 259 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 ZBTB8OSQ8IWT0 167 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 KIAA0319LQ8IZA0 1049 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 LRRC71Q8N4P6 559 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 FNIP1Q8TF40 1166 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 E2F7Q96AV8 911 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 CLIP3Q96DZ5 547 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 FAXDC2Q96IV6 333 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 CFAP57Q96MR6 1250 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 CCDC77Q9BR77 488 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 JAM3Q9BX67 310 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 CCDC163A0A0D9SF12 145 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 A0A0G2JLL6 359 aaPredicted RBP7.61□□□□□ -1.19
CLCN3-202ENST00000360642 ALOX15BO15296 676 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 FKTNO75072 461 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 PECAM1P16284 738 aaPredicted RBP7.61□□□□□ -1.19
CLCN3-202ENST00000360642 BPIP17213 487 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 MARK3P27448 753 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 RFC1P35251 1148 aaPredicted RBP7.61□□□□□ -1.19
CLCN3-202ENST00000360642 TFAMQ00059 246 aaKnown RBP7.61□□□□□ -1.19
CLCN3-202ENST00000360642 PTPN20Q4JDL3 420 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 CYP4A22Q5TCH4 519 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 DENND1BQ6P3S1 775 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 CYB5D1Q6P9G0 228 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 PRRT2Q7Z6L0 340 aaPredicted RBP7.61□□□□□ -1.19
CLCN3-202ENST00000360642 GPC2Q8N158 579 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 CXorf38Q8TB03 319 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 MGARPQ8TDB4 240 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 ACDQ96AP0 544 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 MAGEB18Q96M61 343 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 TTC25Q96NG3 672 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 KCNK9Q9NPC2 374 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 FGFR1OP2Q9NVK5 253 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 HAUS2Q9NVX0 235 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 TBK1Q9UHD2 729 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 CBLCQ9ULV8 474 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 USP15Q9Y4E8 981 aaPredicted RBP7.61□□□□□ -1.19
CLCN3-202ENST00000360642 POLR2AP24928 1970 aaKnown RBP7.61□□□□□ -1.19
CLCN3-202ENST00000360642 MGAMO43451 1857 aa7.61□□□□□ -1.19
CLCN3-202ENST00000360642 SNUPNO95149 360 aaKnown RBP7.6□□□□□ -1.19
CLCN3-202ENST00000360642 PREPP48147 710 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 SLC18A1P54219 525 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 YWHAEP62258 255 aaKnown RBP7.6□□□□□ -1.19
CLCN3-202ENST00000360642 GPS1Q13098 491 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 GALNTL6Q49A17 601 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 ATF7IP2Q5U623 682 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 CDPF1Q6NVV7 123 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 CCDC62Q6P9F0 684 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 ARHGEF18Q6ZSZ5 1173 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 RHPN2Q8IUC4 686 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 TMEM130Q8N3G9 435 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 PCDH19Q8TAB3 1148 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 DYDC1Q8WWB3 177 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 PCDH9Q9HC56 1237 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 SAYSD1Q9NPB0 183 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 SIX4Q9UIU6 781 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 SHOC2Q9UQ13 582 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 OTOFQ9HC10 1997 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 LCE2BO14633 110 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 B4GALT5O43286 388 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 AP1G1O43747 822 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 MGRN1O60291 552 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 LRCH4O75427 683 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 LEFTY1O75610 366 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 CBX7O95931 251 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 IQCF3P0C7M6 154 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 IL1R2P27930 398 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 RAD23BP54727 409 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 MBTD1Q05BQ5 628 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 FASTKD3Q14CZ7 662 aaKnown RBP7.6□□□□□ -1.19
CLCN3-202ENST00000360642 RASA2Q15283 850 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 EXOSC6Q5RKV6 272 aaKnown RBP7.6□□□□□ -1.19
CLCN3-202ENST00000360642 EEF1DP3Q658K8 133 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 NUGGCQ68CJ6 796 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 CGB2Q6NT52 195 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 POMZP3Q6PJE2 187 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 TRABD2AQ86V40 505 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 SRRM1Q8IYB3 904 aaKnown RBP7.6□□□□□ -1.19
CLCN3-202ENST00000360642 THNSL1Q8IYQ7 743 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 ANKRD42Q8N9B4 389 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 KLHL23Q8NBE8 558 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 DENND1AQ8TEH3 1009 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 PRCCQ92733 491 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-202ENST00000360642 ANKRD36BP1Q96IX9 119 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 TMEM121Q9BTD3 319 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 NFKBIZQ9BYH8 718 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 FRMD8P1Q9BZ68 369 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-202ENST00000360642 MINDY3Q9H8M7 445 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 MLXIPLQ9NP71 852 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 UBN1Q9NPG3 1134 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 ABCF3Q9NUQ8 709 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 TNFSF13BQ9Y275 285 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 CEP83Q9Y592 693 aa7.6□□□□□ -1.19
CLCN3-202ENST00000360642 LRRD1A4D1F6 860 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 NDC80O14777 642 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 MAGEB2O15479 319 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 ATP2C2O75185 946 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 TNNC2P02585 160 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 PGK2P07205 417 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms