RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PPP1R15BQ5SWA1 713 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 FASTKD5Q7L8L6 764 aaKnown RBP8.95□□□□□ -0.98
COL6A6-201ENST00000358511 KATNAL2Q8IYT4 538 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 TCAIMQ8N3R3 496 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 HPS4Q9NQG7 708 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 LIMD1Q9UGP4 676 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 VPS26AO75436 327 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 PTGS2P35354 604 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 GPR1P46091 355 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 CNTN1Q12860 1018 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 PMF1Q6P1K2 205 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 FAM228AQ86W67 206 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.95□□□□□ -0.98
COL6A6-201ENST00000358511 AKAP5P24588 427 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 TWF1Q12792 350 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 SUSD4Q5VX71 490 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 SLCO6A1Q86UG4 719 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 FAM126BQ8IXS8 530 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 TINF2Q9BSI4 451 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 S100A14Q9HCY8 104 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 CASP4P49662 377 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 ANXA11P50995 505 aaKnown RBP8.94□□□□□ -0.98
COL6A6-201ENST00000358511 CHSY1Q86X52 802 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 PALB2Q86YC2 1186 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 TRMT13Q9NUP7 481 aaKnown RBP8.94□□□□□ -0.98
COL6A6-201ENST00000358511 LRFN2Q9ULH4 789 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 CHADO15335 359 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 RECQL5O94762 991 aaPredicted RBP8.94□□□□□ -0.98
COL6A6-201ENST00000358511 ATP12AP54707 1039 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 BNIP2Q12982 314 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 EMC2Q15006 297 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 SDE2Q6IQ49 451 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 CRTC3Q6UUV7 619 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 ZCCHC23Q6ZST2 131 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 C16orf86Q6ZW13 317 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 KCNMB4Q86W47 210 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 TMEM132CQ8N3T6 1108 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 MINDY2Q8NBR6 621 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 PSMD13Q9UNM6 376 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 STX11O75558 287 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 TM7SF2O76062 418 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 ARPP19P56211 112 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 NDUFAF6Q330K2 333 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 DENND5AQ6IQ26 1287 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 SATL1Q86VE3 508 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 TAMM41Q96BW9 452 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 HPDLQ96IR7 371 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 RTKNQ9BST9 563 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 GSTK1Q9Y2Q3 226 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 LOC110117498-PIK3R3F6TDL0 507 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 S100A6P06703 90 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 PAEPP09466 180 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 LRRC17Q8N6Y2 441 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 HTRA1Q92743 480 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 BTBD9Q96Q07 612 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 SPON2Q9BUD6 331 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 COQ6Q9Y2Z9 468 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 RBMX2Q9Y388 322 aaKnown RBP8.94□□□□□ -0.98
COL6A6-201ENST00000358511 A0A0G2JLW4 131 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 DHRS12A0PJE2 317 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 PSMD12O00232 456 aaPredicted RBP8.94□□□□□ -0.98
COL6A6-201ENST00000358511 BNIP1Q12981 228 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 MSLNQ13421 630 aaPredicted RBP8.94□□□□□ -0.98
COL6A6-201ENST00000358511 PGS1Q32NB8 556 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 FNDC5Q8NAU1 212 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 PIK3C3Q8NEB9 887 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 SMAD5Q99717 465 aaKnown RBP8.94□□□□□ -0.98
COL6A6-201ENST00000358511 CCNB1IP1Q9NPC3 277 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 LTN1O94822 1766 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 C2orf81A6NN90 581 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 PMPCBO75439 489 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 TSPAN19P0C672 248 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 HOXB6P17509 224 aaKnown RBP8.94□□□□□ -0.98
COL6A6-201ENST00000358511 NR6A1Q15406 480 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 SHROOM1Q2M3G4 852 aaPredicted RBP8.94□□□□□ -0.98
COL6A6-201ENST00000358511 NEK5Q6P3R8 708 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 WDR59Q6PJI9 974 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 RP9Q8TA86 221 aaKnown RBP8.94□□□□□ -0.98
COL6A6-201ENST00000358511 TCF12Q99081 682 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 GANQ9H2C0 597 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 DBNDD1Q9H9R9 158 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 NMRAL1Q9HBL8 299 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 SPASTQ9UBP0 616 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 PCP4L1A6NKN8 68 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 TPP1O14773 563 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 NOS1APO75052 506 aaPredicted RBP8.94□□□□□ -0.98
COL6A6-201ENST00000358511 ACADVLP49748 655 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 PKN1Q16512 942 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 XKR3Q5GH77 459 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 BICRALQ6AI39 1079 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 MCOLN2Q8IZK6 566 aa8.94□□□□□ -0.98
COL6A6-201ENST00000358511 DRAXINQ8NBI3 349 aaPredicted RBP8.94□□□□□ -0.98
COL6A6-201ENST00000358511 FARP2O94887 1054 aaPredicted RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 GSTM1P09488 218 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 CYP2C8P10632 490 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 CENPAP49450 140 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 TTLL9Q3SXZ7 439 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 MZT2AQ6P582 158 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 SCAIQ8N9R8 606 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 FAM47BQ8NA70 645 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms