RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 LAMTOR4Q0VGL1 99 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 KCTD2Q14681 263 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 TBCCQ15814 346 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 FAM47CQ5HY64 1035 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 CATSPERGQ6ZRH7 1159 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 CROCCP3Q8IVE0 287 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 CAPSLQ8WWF8 208 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 MAF1Q9H063 256 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 PCDH18Q9HCL0 1135 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 POMPQ9Y244 141 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 GMEB1Q9Y692 573 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 SNCAIPQ9Y6H5 919 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 SCN9AQ15858 1988 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 CLUHO75153 1309 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 TNS1Q9HBL0 1735 aaKnown RBP10.23□□□□□ -0.77
RNF40-202ENST00000357890 ATAD5Q96QE3 1844 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 TYROBPO43914 113 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 RBL1P28749 1068 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 ARL4AP40617 200 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 SLC1A6P48664 564 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 CLDN10P78369 228 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 PTPN11Q06124 597 aaPredicted RBP10.23□□□□□ -0.77
RNF40-202ENST00000357890 SPDYAQ5MJ70 313 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 AAGABQ6PD74 315 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 MPZL3Q6UWV2 235 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 ZBTB49Q6ZSB9 765 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 TMC7Q7Z402 723 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 RELL1Q8IUW5 271 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 SIX6OS1Q8N1H7 587 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.23□□□□□ -0.77
RNF40-202ENST00000357890 FAM156AQ8NDB6 213 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 OR6B3Q8NGW1 331 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 DENND1AQ8TEH3 1009 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 HPS1Q92902 700 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 COX4I2Q96KJ9 171 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 CPXM1Q96SM3 734 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 GPAMQ9HCL2 828 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 PDLIM7Q9NR12 457 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 PNPOQ9NVS9 261 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 AP3B1O00203 1094 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 RGS20O76081 388 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 ESRRBO95718 433 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 IL1R2P27930 398 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 KPNA1P52294 538 aaPredicted RBP10.23□□□□□ -0.77
RNF40-202ENST00000357890 TLR1Q15399 786 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 RNF19BQ6ZMZ0 732 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 SMYD1Q8NB12 490 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 TEPSINQ96N21 525 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 GPATCH1Q9BRR8 931 aaKnown RBP10.23□□□□□ -0.77
RNF40-202ENST00000357890 NOL6Q9H6R4 1146 aaKnown RBP10.23□□□□□ -0.77
RNF40-202ENST00000357890 GTSE1Q9NYZ3 720 aa10.23□□□□□ -0.77
RNF40-202ENST00000357890 IL18RAPO95256 599 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 EGFRP00533 1210 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 FGFR1P11362 822 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 HALP42357 657 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 N4BP2L1Q5TBK1 243 aaPredicted RBP10.22□□□□□ -0.77
RNF40-202ENST00000357890 METTL7BQ6UX53 244 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 BANPQ8N9N5 519 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 SLC35B2Q8TB61 432 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 TRAPPC12Q8WVT3 735 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 SPATA33Q96N06 139 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 AGAP3Q96P47 875 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 NIFKQ9BYG3 293 aaKnown RBP10.22□□□□□ -0.77
RNF40-202ENST00000357890 RNPEPQ9H4A4 650 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 ZNF510Q9Y2H8 683 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 UTRNP46939 3433 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 MAGEB2O15479 319 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 GJB1P08034 283 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 CLCN3P51790 818 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 MRPS15P82914 257 aaKnown RBP10.22□□□□□ -0.77
RNF40-202ENST00000357890 RPS6KA2Q15349 733 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 ADRM1Q16186 407 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 OGFOD2Q6N063 350 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 DPY19L2Q6NUT2 758 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 C16orf89Q6UX73 402 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 PACS1Q6VY07 963 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
RNF40-202ENST00000357890 ADAM32Q8TC27 787 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 DQX1Q8TE96 717 aaKnown RBP10.22□□□□□ -0.77
RNF40-202ENST00000357890 EIF2AQ9BY44 585 aaKnown RBP10.22□□□□□ -0.77
RNF40-202ENST00000357890 SPC25Q9HBM1 224 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 SSX2IPQ9Y2D8 614 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 LTBP1Q14766 1721 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 CFAP99D6REC4 459 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 E5RJQ4 531 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 MAFO75444 373 aaPredicted RBP10.22□□□□□ -0.77
RNF40-202ENST00000357890 MT-CO1P00395 513 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 TGFB3P10600 412 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 NR4A1P22736 598 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 PPARGP37231 505 aaPredicted RBP10.22□□□□□ -0.77
RNF40-202ENST00000357890 PHKA2P46019 1235 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 TNFAIP2Q03169 654 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 RGS21Q2M5E4 152 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 TMEM214Q6NUQ4 689 aaKnown RBP10.22□□□□□ -0.77
RNF40-202ENST00000357890 PCDH20Q8N6Y1 951 aaKnown RBP10.22□□□□□ -0.77
RNF40-202ENST00000357890 PIWIL2Q8TC59 973 aaKnown RBP10.22□□□□□ -0.77
RNF40-202ENST00000357890 NRBF2Q96F24 287 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 CNPY3Q9BT09 278 aa10.22□□□□□ -0.77
RNF40-202ENST00000357890 GCOM2Q9BZD3 368 aaPredicted RBP10.22□□□□□ -0.77
RNF40-202ENST00000357890 THAP1Q9NVV9 213 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms