RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 DUS2Q9NX74 493 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 THEGQ9P2T0 379 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 R3HDM2Q9Y2K5 976 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 HBS1LQ9Y450 684 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 LAMA5O15230 3695 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 NUP210Q8TEM1 1887 aaPredicted RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 IGLV3-10A0A075B6K4 115 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 E2F8A0AVK6 867 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 WASH3PC4AMC7 463 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PRRT4C9JH25 899 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 SPOPO43791 374 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PRPSAP2O60256 369 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 GJB3O75712 270 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 CD160O95971 181 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 MT-CO1P00395 513 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PDGFBP01127 241 aaPredicted RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 CD70P32970 193 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 CTNNA1P35221 906 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 CDKN2BP42772 138 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 HARS2P49590 506 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 CDH6P55285 790 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 SNX16P57768 344 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 MRPS25P82663 173 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 GBE1Q04446 702 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 SCAPQ12770 1279 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 IHHQ14623 411 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 DPYSL2Q16555 572 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 CXorf57Q6NSI4 855 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 OTOP3Q7RTS5 596 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PEX26Q7Z412 305 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PRUNE1Q86TP1 453 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 RNF135Q8IUD6 432 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 APCDD1Q8J025 514 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 PLD5Q8N7P1 536 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 FAM71BQ8TC56 605 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 DEPDC1BQ8WUY9 529 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 IRF7Q92985 503 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 ELSPBP1Q96BH3 223 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 CELF6Q96J87 481 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 LMLNQ96KR4 655 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 NSMCE3Q96MG7 304 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 NECTIN4Q96NY8 510 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 CSPG4P5Q96PW8 444 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 ECT2Q9H8V3 914 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 OLA1Q9NTK5 396 aaKnown RBP4.16□□□□□ -1.74
LIG4-201ENST00000356922 MUTYHQ9UIF7 546 aa4.16□□□□□ -1.74
LIG4-201ENST00000356922 CACNA1IQ9P0X4 2223 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 TICRRQ7Z2Z1 1910 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 LRRD1A4D1F6 860 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 KRBA1A5PL33 1030 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 DRGXA6NNA5 263 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 NEDD8-MDP1E9PL57 170 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 F9P00740 461 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 CISD3P0C7P0 127 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 TYRP14679 529 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 PECAM1P16284 738 aaPredicted RBP4.15□□□□□ -1.74
LIG4-201ENST00000356922 ERCC2P18074 760 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 GJA4P35212 333 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 ACVRL1P37023 503 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 OPRD1P41143 372 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 CTSOP43234 321 aaPredicted RBP4.15□□□□□ -1.74
LIG4-201ENST00000356922 AMPD2Q01433 879 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 DPYSQ14117 519 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 SIX1Q15475 284 aaPredicted RBP4.15□□□□□ -1.74
LIG4-201ENST00000356922 TAZQ16635 292 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 GEN1Q17RS7 908 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 KAZNQ674X7 775 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 ADHFE1Q8IWW8 467 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 TDRD5Q8NAT2 981 aaKnown RBP4.15□□□□□ -1.74
LIG4-201ENST00000356922 LRRN4CLQ8ND94 238 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 NXPE3Q969Y0 559 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 NTAN1Q96AB6 310 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 HAUS1Q96CS2 278 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 ALG14Q96F25 216 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 C1orf74Q96LT6 269 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 HAPLN3Q96S86 360 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 CALN1Q9BXU9 219 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 MTG2Q9H4K7 406 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 ARHGEF4Q9NR80 690 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 SPHK2Q9NRA0 654 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 SH3BP1Q9Y3L3 701 aa4.15□□□□□ -1.74
LIG4-201ENST00000356922 KNL1Q8NG31 2342 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 TTC24A2A3L6 582 aaPredicted RBP4.15□□□□□ -1.75
LIG4-201ENST00000356922 DCLK1O15075 740 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 ZSCAN12O43309 604 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 TBL1XO60907 577 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 ECI2O75521 394 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 DDX6P26196 483 aaKnown RBP eCLIP4.15□□□□□ -1.75
LIG4-201ENST00000356922 EPHB2P29323 1055 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 MAN1A1P33908 653 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 ETF1P62495 437 aaKnown RBP4.15□□□□□ -1.75
LIG4-201ENST00000356922 DYNLT1P63172 113 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 NNTQ13423 1086 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 ACAP1Q15027 740 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 ANO4Q32M45 955 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 BOLA3Q53S33 107 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 ANKRD20A8PQ5CZ79 823 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 RWDD4Q6NW29 188 aaKnown RBP4.15□□□□□ -1.75
LIG4-201ENST00000356922 RFX8Q6ZV50 586 aa4.15□□□□□ -1.75
LIG4-201ENST00000356922 ZSCAN30Q86W11 494 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms